==649979== Memcheck, a memory error detector ==649979== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==649979== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==649979== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==649979== Parent PID: 629821 ==649979== ==649979== ==649979== FILE DESCRIPTORS: 9 open (3 std) at exit. ==649979== Open file descriptor 12: ==649979== at 0x1183F22D: pipe (pipe.c:29) ==649979== by 0x1A1BA07D: ??? ==649979== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==649979== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==649979== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==649979== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==649979== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==649979== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==649979== by 0x14256B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==649979== by 0x13A4CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==649979== by 0x13D096: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==649979== by 0x13CF36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==649979== by 0x13D5CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==649979== by 0x138800: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==649979== ==649979== Open file descriptor 8: /dev/shm/open_mpi.0000 ==649979== at 0x11843BCC: __open_nocancel (open64_nocancel.c:39) ==649979== by 0x117C7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==649979== by 0x10F5C822: ??? ==649979== by 0x10F5C96F: ??? ==649979== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==649979== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==649979== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==649979== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==649979== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==649979== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==649979== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==649979== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==649979== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==649979== by 0x14256B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==649979== by 0x13A4CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==649979== by 0x13D096: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==649979== by 0x13CF36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==649979== by 0x13D5CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==649979== by 0x138800: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==649979== ==649979== Open file descriptor 114: ==649979== ==649979== ==649979== Open file descriptor 111: ==649979== ==649979== ==649979== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==649979== ==649979== ==649979== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==649979== ==649979== ==649979== ==649979== HEAP SUMMARY: ==649979== in use at exit: 700,786 bytes in 9,378 blocks ==649979== total heap usage: 1,343,605 allocs, 1,334,227 frees, 1,468,538,451 bytes allocated ==649979== ==649979== LEAK SUMMARY: ==649979== definitely lost: 0 bytes in 0 blocks ==649979== indirectly lost: 0 bytes in 0 blocks ==649979== possibly lost: 0 bytes in 0 blocks ==649979== still reachable: 56 bytes in 3 blocks ==649979== suppressed: 700,730 bytes in 9,375 blocks ==649979== Reachable blocks (those to which a pointer was found) are not shown. ==649979== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==649979== ==649979== For lists of detected and suppressed errors, rerun with: -s ==649979== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)