==631737== Memcheck, a memory error detector ==631737== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==631737== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==631737== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==631737== Parent PID: 629821 ==631737== ==631737== ==631737== FILE DESCRIPTORS: 9 open (3 std) at exit. ==631737== Open file descriptor 12: ==631737== at 0xEAEB22D: pipe (pipe.c:29) ==631737== by 0x188D707D: ??? ==631737== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631737== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631737== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631737== by 0xF417D38: PetscInitialize (pinit.c:924) ==631737== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631737== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631737== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==631737== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631737== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631737== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631737== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631737== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==631737== ==631737== Open file descriptor 8: /dev/shm/open_mpi.0000 ==631737== at 0xEAEFBCC: __open_nocancel (open64_nocancel.c:39) ==631737== by 0xEA73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==631737== by 0xE2FD822: ??? ==631737== by 0xE2FD96F: ??? ==631737== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631737== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631737== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631737== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631737== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631737== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631737== by 0xF417D38: PetscInitialize (pinit.c:924) ==631737== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631737== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631737== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==631737== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631737== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631737== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631737== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631737== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==631737== ==631737== Open file descriptor 114: ==631737== ==631737== ==631737== Open file descriptor 111: ==631737== ==631737== ==631737== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==631737== ==631737== ==631737== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==631737== ==631737== ==631737== ==631737== HEAP SUMMARY: ==631737== in use at exit: 700,702 bytes in 9,374 blocks ==631737== total heap usage: 12,820,308 allocs, 12,810,934 frees, 3,878,103,683 bytes allocated ==631737== ==631737== LEAK SUMMARY: ==631737== definitely lost: 0 bytes in 0 blocks ==631737== indirectly lost: 0 bytes in 0 blocks ==631737== possibly lost: 0 bytes in 0 blocks ==631737== still reachable: 56 bytes in 3 blocks ==631737== suppressed: 700,646 bytes in 9,371 blocks ==631737== Reachable blocks (those to which a pointer was found) are not shown. ==631737== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==631737== ==631737== For lists of detected and suppressed errors, rerun with: -s ==631737== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)