==631643== Memcheck, a memory error detector ==631643== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==631643== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==631643== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==631643== Parent PID: 629821 ==631643== ==631643== ==631643== FILE DESCRIPTORS: 9 open (3 std) at exit. ==631643== Open file descriptor 12: ==631643== at 0xE57022D: pipe (pipe.c:29) ==631643== by 0x188D807D: ??? ==631643== by 0x12E274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631643== by 0xDE7A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631643== by 0xDE13D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631643== by 0xCB0AD38: PetscInitialize (pinit.c:924) ==631643== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631643== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631643== by 0x13E6D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==631643== by 0x135B1F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631643== by 0x1389B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631643== by 0x138854: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631643== by 0x138EEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631643== by 0x133E50: main (TestPottsUpdateRules.cpp:19) ==631643== ==631643== Open file descriptor 8: /dev/shm/open_mpi.0000 ==631643== at 0xE574BCC: __open_nocancel (open64_nocancel.c:39) ==631643== by 0xE4F8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==631643== by 0xC9B2822: ??? ==631643== by 0xC9B296F: ??? ==631643== by 0x12ECC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631643== by 0x12ECC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631643== by 0x12E82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==631643== by 0x12E272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==631643== by 0xDE7A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631643== by 0xDE13D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==631643== by 0xCB0AD38: PetscInitialize (pinit.c:924) ==631643== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==631643== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==631643== by 0x13E6D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==631643== by 0x135B1F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==631643== by 0x1389B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==631643== by 0x138854: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==631643== by 0x138EEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==631643== by 0x133E50: main (TestPottsUpdateRules.cpp:19) ==631643== ==631643== Open file descriptor 114: ==631643== ==631643== ==631643== Open file descriptor 111: ==631643== ==631643== ==631643== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==631643== ==631643== ==631643== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==631643== ==631643== ==631643== ==631643== HEAP SUMMARY: ==631643== in use at exit: 700,770 bytes in 9,378 blocks ==631643== total heap usage: 68,990 allocs, 59,612 frees, 1,354,924,508 bytes allocated ==631643== ==631643== LEAK SUMMARY: ==631643== definitely lost: 0 bytes in 0 blocks ==631643== indirectly lost: 0 bytes in 0 blocks ==631643== possibly lost: 0 bytes in 0 blocks ==631643== still reachable: 56 bytes in 3 blocks ==631643== suppressed: 700,714 bytes in 9,375 blocks ==631643== Reachable blocks (those to which a pointer was found) are not shown. ==631643== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==631643== ==631643== For lists of detected and suppressed errors, rerun with: -s ==631643== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)