==650415== Memcheck, a memory error detector ==650415== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==650415== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==650415== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==650415== Parent PID: 629821 ==650415== ==650415== ==650415== FILE DESCRIPTORS: 9 open (3 std) at exit. ==650415== Open file descriptor 12: ==650415== at 0x1175822D: pipe (pipe.c:29) ==650415== by 0x1A1BA07D: ??? ==650415== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==650415== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650415== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650415== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==650415== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==650415== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==650415== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==650415== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==650415== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==650415== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==650415== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==650415== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==650415== ==650415== Open file descriptor 8: /dev/shm/open_mpi.0000 ==650415== at 0x1175CBCC: __open_nocancel (open64_nocancel.c:39) ==650415== by 0x116E0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==650415== by 0x10F5C822: ??? ==650415== by 0x10F5C96F: ??? ==650415== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650415== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650415== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650415== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==650415== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650415== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650415== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==650415== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==650415== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==650415== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==650415== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==650415== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==650415== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==650415== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==650415== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==650415== ==650415== Open file descriptor 114: ==650415== ==650415== ==650415== Open file descriptor 111: ==650415== ==650415== ==650415== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==650415== ==650415== ==650415== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==650415== ==650415== ==650415== ==650415== HEAP SUMMARY: ==650415== in use at exit: 700,786 bytes in 9,378 blocks ==650415== total heap usage: 1,753,959 allocs, 1,744,581 frees, 1,533,388,512 bytes allocated ==650415== ==650415== LEAK SUMMARY: ==650415== definitely lost: 0 bytes in 0 blocks ==650415== indirectly lost: 0 bytes in 0 blocks ==650415== possibly lost: 0 bytes in 0 blocks ==650415== still reachable: 56 bytes in 3 blocks ==650415== suppressed: 700,730 bytes in 9,375 blocks ==650415== Reachable blocks (those to which a pointer was found) are not shown. ==650415== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==650415== ==650415== For lists of detected and suppressed errors, rerun with: -s ==650415== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)