==650530== Memcheck, a memory error detector ==650530== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==650530== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==650530== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==650530== Parent PID: 629821 ==650530== ==650530== ==650530== FILE DESCRIPTORS: 9 open (3 std) at exit. ==650530== Open file descriptor 12: ==650530== at 0x1175822D: pipe (pipe.c:29) ==650530== by 0x1A1BA07D: ??? ==650530== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==650530== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650530== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650530== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==650530== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==650530== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==650530== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==650530== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==650530== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==650530== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==650530== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==650530== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==650530== ==650530== Open file descriptor 8: /dev/shm/open_mpi.0000 ==650530== at 0x1175CBCC: __open_nocancel (open64_nocancel.c:39) ==650530== by 0x116E0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==650530== by 0x10F5C822: ??? ==650530== by 0x10F5C96F: ??? ==650530== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650530== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650530== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==650530== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==650530== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650530== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==650530== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==650530== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==650530== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==650530== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==650530== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==650530== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==650530== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==650530== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==650530== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==650530== ==650530== Open file descriptor 114: ==650530== ==650530== ==650530== Open file descriptor 111: ==650530== ==650530== ==650530== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==650530== ==650530== ==650530== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==650530== ==650530== ==650530== ==650530== HEAP SUMMARY: ==650530== in use at exit: 700,866 bytes in 9,379 blocks ==650530== total heap usage: 1,617,539 allocs, 1,608,160 frees, 1,474,203,013 bytes allocated ==650530== ==650530== LEAK SUMMARY: ==650530== definitely lost: 0 bytes in 0 blocks ==650530== indirectly lost: 0 bytes in 0 blocks ==650530== possibly lost: 0 bytes in 0 blocks ==650530== still reachable: 136 bytes in 4 blocks ==650530== suppressed: 700,730 bytes in 9,375 blocks ==650530== Reachable blocks (those to which a pointer was found) are not shown. ==650530== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==650530== ==650530== For lists of detected and suppressed errors, rerun with: -s ==650530== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)