==692399== Memcheck, a memory error detector ==692399== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692399== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692399== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==692399== Parent PID: 690814 ==692399== ==692399== ==692399== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692399== Open file descriptor 12: ==692399== at 0xC8FC22D: pipe (pipe.c:29) ==692399== by 0x17D0B07D: ??? ==692399== by 0x1330C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692399== by 0xFAD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692399== by 0xFA6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692399== by 0xE762D38: PetscInitialize (pinit.c:924) ==692399== by 0xC1BD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692399== by 0xC1BD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692399== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692399== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692399== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692399== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692399== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692399== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==692399== ==692399== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692399== at 0xC900BCC: __open_nocancel (open64_nocancel.c:39) ==692399== by 0xC884C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692399== by 0xC1F5822: ??? ==692399== by 0xC1F596F: ??? ==692399== by 0x133B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692399== by 0x133B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692399== by 0x13367922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692399== by 0x1330C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692399== by 0xFAD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692399== by 0xFA6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692399== by 0xE762D38: PetscInitialize (pinit.c:924) ==692399== by 0xC1BD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692399== by 0xC1BD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692399== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692399== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692399== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692399== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692399== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692399== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==692399== ==692399== Open file descriptor 116: ==692399== ==692399== ==692399== Open file descriptor 112: ==692399== ==692399== ==692399== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==692399== ==692399== ==692399== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692399== ==692399== ==692399== ==692399== HEAP SUMMARY: ==692399== in use at exit: 700,770 bytes in 9,378 blocks ==692399== total heap usage: 57,029 allocs, 47,651 frees, 1,354,099,176 bytes allocated ==692399== ==692399== LEAK SUMMARY: ==692399== definitely lost: 0 bytes in 0 blocks ==692399== indirectly lost: 0 bytes in 0 blocks ==692399== possibly lost: 0 bytes in 0 blocks ==692399== still reachable: 56 bytes in 3 blocks ==692399== suppressed: 700,714 bytes in 9,375 blocks ==692399== Reachable blocks (those to which a pointer was found) are not shown. ==692399== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692399== ==692399== For lists of detected and suppressed errors, rerun with: -s ==692399== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)