==713607== Memcheck, a memory error detector ==713607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==713607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==713607== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==713607== Parent PID: 690814 ==713607== ==713607== ==713607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==713607== Open file descriptor 12: ==713607== at 0xA10122D: pipe (pipe.c:29) ==713607== by 0x13CC207D: ??? ==713607== by 0xF4C44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==713607== by 0xB812418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==713607== by 0xB7ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==713607== by 0xA4A2D38: PetscInitialize (pinit.c:924) ==713607== by 0x99EA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==713607== by 0x99EA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==713607== by 0x12D0CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==713607== by 0x12653D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==713607== by 0x128EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==713607== by 0x128DEF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==713607== by 0x129403: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==713607== by 0x124D40: main (TestCheckpointing.cpp:18) ==713607== ==713607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==713607== at 0xA105BCC: __open_nocancel (open64_nocancel.c:39) ==713607== by 0xA089C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==713607== by 0x9A22822: ??? ==713607== by 0x9A2296F: ??? ==713607== by 0xF5696DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==713607== by 0xF569938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==713607== by 0xF51F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==713607== by 0xF4C42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==713607== by 0xB812418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==713607== by 0xB7ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==713607== by 0xA4A2D38: PetscInitialize (pinit.c:924) ==713607== by 0x99EA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==713607== by 0x99EA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==713607== by 0x12D0CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==713607== by 0x12653D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==713607== by 0x128EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==713607== by 0x128DEF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==713607== by 0x129403: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==713607== by 0x124D40: main (TestCheckpointing.cpp:18) ==713607== ==713607== Open file descriptor 116: ==713607== ==713607== ==713607== Open file descriptor 112: ==713607== ==713607== ==713607== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==713607== ==713607== ==713607== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==713607== ==713607== ==713607== ==713607== HEAP SUMMARY: ==713607== in use at exit: 701,234 bytes in 9,387 blocks ==713607== total heap usage: 833,968 allocs, 824,581 frees, 1,457,517,309 bytes allocated ==713607== ==713607== LEAK SUMMARY: ==713607== definitely lost: 0 bytes in 0 blocks ==713607== indirectly lost: 0 bytes in 0 blocks ==713607== possibly lost: 0 bytes in 0 blocks ==713607== still reachable: 24 bytes in 2 blocks ==713607== suppressed: 701,210 bytes in 9,385 blocks ==713607== Reachable blocks (those to which a pointer was found) are not shown. ==713607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==713607== ==713607== For lists of detected and suppressed errors, rerun with: -s ==713607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 63 from 37)