==690817== Memcheck, a memory error detector ==690817== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==690817== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==690817== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==690817== Parent PID: 690814 ==690817== ==690817== ==690817== FILE DESCRIPTORS: 9 open (3 std) at exit. ==690817== Open file descriptor 12: ==690817== at 0x4CC422D: pipe (pipe.c:29) ==690817== by 0xAED707D: ??? ==690817== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==690817== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==690817== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==690817== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==690817== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==690817== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==690817== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==690817== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==690817== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==690817== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==690817== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==690817== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==690817== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==690817== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==690817== by 0x119C80: main (TestCitations.cpp:18) ==690817== ==690817== Open file descriptor 8: /dev/shm/open_mpi.0000 ==690817== at 0x4CC8BCC: __open_nocancel (open64_nocancel.c:39) ==690817== by 0x4C4CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==690817== by 0x4944822: ??? ==690817== by 0x494496F: ??? ==690817== by 0x8A906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==690817== by 0x8A90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==690817== by 0x8A46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==690817== by 0x89EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==690817== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==690817== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==690817== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==690817== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==690817== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==690817== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==690817== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==690817== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==690817== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==690817== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==690817== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==690817== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==690817== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==690817== by 0x119C80: main (TestCitations.cpp:18) ==690817== ==690817== Open file descriptor 116: ==690817== ==690817== ==690817== Open file descriptor 112: ==690817== ==690817== ==690817== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==690817== ==690817== ==690817== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==690817== ==690817== ==690817== ==690817== HEAP SUMMARY: ==690817== in use at exit: 700,274 bytes in 9,377 blocks ==690817== total heap usage: 47,406 allocs, 38,029 frees, 1,353,323,118 bytes allocated ==690817== ==690817== LEAK SUMMARY: ==690817== definitely lost: 0 bytes in 0 blocks ==690817== indirectly lost: 0 bytes in 0 blocks ==690817== possibly lost: 0 bytes in 0 blocks ==690817== still reachable: 24 bytes in 2 blocks ==690817== suppressed: 700,250 bytes in 9,375 blocks ==690817== Reachable blocks (those to which a pointer was found) are not shown. ==690817== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==690817== ==690817== For lists of detected and suppressed errors, rerun with: -s ==690817== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)