==710958== Memcheck, a memory error detector ==710958== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==710958== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==710958== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==710958== Parent PID: 690814 ==710958== ==710958== ==710958== FILE DESCRIPTORS: 9 open (3 std) at exit. ==710958== Open file descriptor 12: ==710958== at 0xF7FE22D: pipe (pipe.c:29) ==710958== by 0x195EB07D: ??? ==710958== by 0x14BEC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==710958== by 0x1149A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710958== by 0x11433D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710958== by 0x1012AD38: PetscInitialize (pinit.c:924) ==710958== by 0xEFD858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==710958== by 0xEFD85D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==710958== by 0x24AE22: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==710958== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==710958== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==710958== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==710958== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==710958== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==710958== ==710958== Open file descriptor 8: /dev/shm/open_mpi.0000 ==710958== at 0xF802BCC: __open_nocancel (open64_nocancel.c:39) ==710958== by 0xF786C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==710958== by 0xF010822: ??? ==710958== by 0xF01096F: ??? ==710958== by 0x14C916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710958== by 0x14C91938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710958== by 0x14C47922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710958== by 0x14BEC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==710958== by 0x1149A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710958== by 0x11433D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710958== by 0x1012AD38: PetscInitialize (pinit.c:924) ==710958== by 0xEFD858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==710958== by 0xEFD85D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==710958== by 0x24AE22: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==710958== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==710958== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==710958== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==710958== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==710958== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==710958== ==710958== Open file descriptor 116: ==710958== ==710958== ==710958== Open file descriptor 112: ==710958== ==710958== ==710958== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==710958== ==710958== ==710958== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==710958== ==710958== ==710958== ==710958== HEAP SUMMARY: ==710958== in use at exit: 700,718 bytes in 9,374 blocks ==710958== total heap usage: 6,235,344 allocs, 6,225,970 frees, 2,065,254,062 bytes allocated ==710958== ==710958== LEAK SUMMARY: ==710958== definitely lost: 0 bytes in 0 blocks ==710958== indirectly lost: 0 bytes in 0 blocks ==710958== possibly lost: 0 bytes in 0 blocks ==710958== still reachable: 56 bytes in 3 blocks ==710958== suppressed: 700,662 bytes in 9,371 blocks ==710958== Reachable blocks (those to which a pointer was found) are not shown. ==710958== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==710958== ==710958== For lists of detected and suppressed errors, rerun with: -s ==710958== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)