==710977== Memcheck, a memory error detector ==710977== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==710977== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==710977== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==710977== Parent PID: 690814 ==710977== ==710977== ==710977== FILE DESCRIPTORS: 9 open (3 std) at exit. ==710977== Open file descriptor 12: ==710977== at 0x10BCC22D: pipe (pipe.c:29) ==710977== by 0x195EB07D: ??? ==710977== by 0x14B4E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==710977== by 0x104D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710977== by 0x1046FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710977== by 0xF166D38: PetscInitialize (pinit.c:924) ==710977== by 0xEFD858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==710977== by 0xEFD85D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==710977== by 0x232E47: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==710977== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==710977== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==710977== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==710977== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==710977== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==710977== ==710977== Open file descriptor 8: /dev/shm/open_mpi.0000 ==710977== at 0x10BD0BCC: __open_nocancel (open64_nocancel.c:39) ==710977== by 0x10B54C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==710977== by 0xF010822: ??? ==710977== by 0xF01096F: ??? ==710977== by 0x14BF36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710977== by 0x14BF3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710977== by 0x14BA9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==710977== by 0x14B4E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==710977== by 0x104D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710977== by 0x1046FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==710977== by 0xF166D38: PetscInitialize (pinit.c:924) ==710977== by 0xEFD858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==710977== by 0xEFD85D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==710977== by 0x232E47: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==710977== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==710977== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==710977== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==710977== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==710977== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==710977== ==710977== Open file descriptor 116: ==710977== ==710977== ==710977== Open file descriptor 112: ==710977== ==710977== ==710977== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==710977== ==710977== ==710977== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==710977== ==710977== ==710977== ==710977== HEAP SUMMARY: ==710977== in use at exit: 700,718 bytes in 9,374 blocks ==710977== total heap usage: 3,331,240 allocs, 3,321,866 frees, 1,615,607,766 bytes allocated ==710977== ==710977== LEAK SUMMARY: ==710977== definitely lost: 0 bytes in 0 blocks ==710977== indirectly lost: 0 bytes in 0 blocks ==710977== possibly lost: 0 bytes in 0 blocks ==710977== still reachable: 56 bytes in 3 blocks ==710977== suppressed: 700,662 bytes in 9,371 blocks ==710977== Reachable blocks (those to which a pointer was found) are not shown. ==710977== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==710977== ==710977== For lists of detected and suppressed errors, rerun with: -s ==710977== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)