==692512== Memcheck, a memory error detector ==692512== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692512== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692512== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==692512== Parent PID: 690814 ==692512== ==692512== ==692512== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692512== Open file descriptor 12: ==692512== at 0xDED522D: pipe (pipe.c:29) ==692512== by 0x17D0B07D: ??? ==692512== by 0x1330C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692512== by 0xFAD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692512== by 0xFA6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692512== by 0xE760D38: PetscInitialize (pinit.c:924) ==692512== by 0xD79658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692512== by 0xD7965D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692512== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692512== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692512== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692512== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692512== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692512== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==692512== ==692512== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692512== at 0xDED9BCC: __open_nocancel (open64_nocancel.c:39) ==692512== by 0xDE5DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692512== by 0xD7CE822: ??? ==692512== by 0xD7CE96F: ??? ==692512== by 0x133B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692512== by 0x133B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692512== by 0x13367922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692512== by 0x1330C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692512== by 0xFAD2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692512== by 0xFA6BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692512== by 0xE760D38: PetscInitialize (pinit.c:924) ==692512== by 0xD79658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692512== by 0xD7965D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692512== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692512== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692512== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692512== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692512== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692512== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==692512== ==692512== Open file descriptor 116: ==692512== ==692512== ==692512== Open file descriptor 112: ==692512== ==692512== ==692512== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==692512== ==692512== ==692512== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692512== ==692512== ==692512== ==692512== HEAP SUMMARY: ==692512== in use at exit: 700,702 bytes in 9,374 blocks ==692512== total heap usage: 20,192,235 allocs, 20,182,861 frees, 2,577,763,265 bytes allocated ==692512== ==692512== LEAK SUMMARY: ==692512== definitely lost: 0 bytes in 0 blocks ==692512== indirectly lost: 0 bytes in 0 blocks ==692512== possibly lost: 0 bytes in 0 blocks ==692512== still reachable: 56 bytes in 3 blocks ==692512== suppressed: 700,646 bytes in 9,371 blocks ==692512== Reachable blocks (those to which a pointer was found) are not shown. ==692512== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692512== ==692512== For lists of detected and suppressed errors, rerun with: -s ==692512== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)