==693135== Memcheck, a memory error detector ==693135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==693135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==693135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==693135== Parent PID: 690814 ==693135== ==693135== ==693135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==693135== Open file descriptor 12: ==693135== at 0xE2CD22D: pipe (pipe.c:29) ==693135== by 0x17D0907D: ??? ==693135== by 0x1330E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693135== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693135== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693135== by 0xE849D38: PetscInitialize (pinit.c:924) ==693135== by 0xDAA758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693135== by 0xDAA75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693135== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==693135== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693135== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693135== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693135== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693135== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==693135== ==693135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==693135== at 0xE2D1BCC: __open_nocancel (open64_nocancel.c:39) ==693135== by 0xE255C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==693135== by 0xDADF822: ??? ==693135== by 0xDADF96F: ??? ==693135== by 0x133B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693135== by 0x133B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693135== by 0x13369922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693135== by 0x1330E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693135== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693135== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693135== by 0xE849D38: PetscInitialize (pinit.c:924) ==693135== by 0xDAA758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693135== by 0xDAA75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693135== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==693135== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693135== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693135== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693135== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693135== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==693135== ==693135== Open file descriptor 116: ==693135== ==693135== ==693135== Open file descriptor 112: ==693135== ==693135== ==693135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==693135== ==693135== ==693135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==693135== ==693135== ==693135== ==693135== HEAP SUMMARY: ==693135== in use at exit: 700,702 bytes in 9,374 blocks ==693135== total heap usage: 7,452,201 allocs, 7,442,827 frees, 2,652,309,600 bytes allocated ==693135== ==693135== LEAK SUMMARY: ==693135== definitely lost: 0 bytes in 0 blocks ==693135== indirectly lost: 0 bytes in 0 blocks ==693135== possibly lost: 0 bytes in 0 blocks ==693135== still reachable: 56 bytes in 3 blocks ==693135== suppressed: 700,646 bytes in 9,371 blocks ==693135== Reachable blocks (those to which a pointer was found) are not shown. ==693135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==693135== ==693135== For lists of detected and suppressed errors, rerun with: -s ==693135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)