==693169== Memcheck, a memory error detector ==693169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==693169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==693169== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==693169== Parent PID: 690814 ==693169== ==693169== ==693169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==693169== Open file descriptor 12: ==693169== at 0xF3D222D: pipe (pipe.c:29) ==693169== by 0x17D0907D: ??? ==693169== by 0x1326C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693169== by 0xEBF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693169== by 0xEB8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693169== by 0xD885D38: PetscInitialize (pinit.c:924) ==693169== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693169== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693169== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==693169== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693169== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693169== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693169== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693169== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==693169== ==693169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==693169== at 0xF3D6BCC: __open_nocancel (open64_nocancel.c:39) ==693169== by 0xF35AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==693169== by 0xD72F822: ??? ==693169== by 0xD72F96F: ??? ==693169== by 0x133136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693169== by 0x13313938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693169== by 0x132C9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693169== by 0x1326C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693169== by 0xEBF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693169== by 0xEB8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693169== by 0xD885D38: PetscInitialize (pinit.c:924) ==693169== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693169== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693169== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==693169== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693169== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693169== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693169== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693169== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==693169== ==693169== Open file descriptor 116: ==693169== ==693169== ==693169== Open file descriptor 112: ==693169== ==693169== ==693169== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==693169== ==693169== ==693169== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==693169== ==693169== ==693169== ==693169== HEAP SUMMARY: ==693169== in use at exit: 700,702 bytes in 9,374 blocks ==693169== total heap usage: 9,143,042 allocs, 9,133,668 frees, 2,549,145,478 bytes allocated ==693169== ==693169== LEAK SUMMARY: ==693169== definitely lost: 0 bytes in 0 blocks ==693169== indirectly lost: 0 bytes in 0 blocks ==693169== possibly lost: 0 bytes in 0 blocks ==693169== still reachable: 56 bytes in 3 blocks ==693169== suppressed: 700,646 bytes in 9,371 blocks ==693169== Reachable blocks (those to which a pointer was found) are not shown. ==693169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==693169== ==693169== For lists of detected and suppressed errors, rerun with: -s ==693169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)