==692708== Memcheck, a memory error detector ==692708== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692708== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692708== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==692708== Parent PID: 690814 ==692708== ==692708== ==692708== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692708== Open file descriptor 12: ==692708== at 0xDF1D22D: pipe (pipe.c:29) ==692708== by 0x17D0B07D: ??? ==692708== by 0x1330C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692708== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692708== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692708== by 0xE849D38: PetscInitialize (pinit.c:924) ==692708== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692708== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692708== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692708== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692708== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692708== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692708== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692708== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==692708== ==692708== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692708== at 0xDF21BCC: __open_nocancel (open64_nocancel.c:39) ==692708== by 0xDEA5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692708== by 0xD72F822: ??? ==692708== by 0xD72F96F: ??? ==692708== by 0x133B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692708== by 0x133B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692708== by 0x13367922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692708== by 0x1330C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692708== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692708== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692708== by 0xE849D38: PetscInitialize (pinit.c:924) ==692708== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692708== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692708== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692708== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692708== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692708== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692708== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692708== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==692708== ==692708== Open file descriptor 116: ==692708== ==692708== ==692708== Open file descriptor 112: ==692708== ==692708== ==692708== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==692708== ==692708== ==692708== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692708== ==692708== ==692708== ==692708== HEAP SUMMARY: ==692708== in use at exit: 700,702 bytes in 9,374 blocks ==692708== total heap usage: 12,718,328 allocs, 12,708,954 frees, 3,858,411,099 bytes allocated ==692708== ==692708== LEAK SUMMARY: ==692708== definitely lost: 0 bytes in 0 blocks ==692708== indirectly lost: 0 bytes in 0 blocks ==692708== possibly lost: 0 bytes in 0 blocks ==692708== still reachable: 56 bytes in 3 blocks ==692708== suppressed: 700,646 bytes in 9,371 blocks ==692708== Reachable blocks (those to which a pointer was found) are not shown. ==692708== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692708== ==692708== For lists of detected and suppressed errors, rerun with: -s ==692708== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)