==693320== Memcheck, a memory error detector ==693320== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==693320== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==693320== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==693320== Parent PID: 690814 ==693320== ==693320== ==693320== FILE DESCRIPTORS: 9 open (3 std) at exit. ==693320== Open file descriptor 12: ==693320== at 0xE39922D: pipe (pipe.c:29) ==693320== by 0x17D0A07D: ??? ==693320== by 0x1342F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693320== by 0x10035418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693320== by 0xFFCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693320== by 0xECC5D38: PetscInitialize (pinit.c:924) ==693320== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693320== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693320== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==693320== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693320== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693320== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693320== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693320== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==693320== ==693320== Open file descriptor 8: /dev/shm/open_mpi.0000 ==693320== at 0xE39DBCC: __open_nocancel (open64_nocancel.c:39) ==693320== by 0xE321C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==693320== by 0xD72F822: ??? ==693320== by 0xD72F96F: ??? ==693320== by 0x134D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693320== by 0x134D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693320== by 0x1348A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==693320== by 0x1342F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==693320== by 0x10035418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693320== by 0xFFCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==693320== by 0xECC5D38: PetscInitialize (pinit.c:924) ==693320== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==693320== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==693320== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==693320== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==693320== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==693320== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==693320== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==693320== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==693320== ==693320== Open file descriptor 116: ==693320== ==693320== ==693320== Open file descriptor 112: ==693320== ==693320== ==693320== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==693320== ==693320== ==693320== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==693320== ==693320== ==693320== ==693320== HEAP SUMMARY: ==693320== in use at exit: 700,702 bytes in 9,374 blocks ==693320== total heap usage: 6,911,746 allocs, 6,902,372 frees, 8,038,674,598 bytes allocated ==693320== ==693320== LEAK SUMMARY: ==693320== definitely lost: 0 bytes in 0 blocks ==693320== indirectly lost: 0 bytes in 0 blocks ==693320== possibly lost: 0 bytes in 0 blocks ==693320== still reachable: 56 bytes in 3 blocks ==693320== suppressed: 700,646 bytes in 9,371 blocks ==693320== Reachable blocks (those to which a pointer was found) are not shown. ==693320== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==693320== ==693320== For lists of detected and suppressed errors, rerun with: -s ==693320== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)