==707288== Memcheck, a memory error detector ==707288== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==707288== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==707288== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==707288== Parent PID: 690814 ==707288== ==707288== ==707288== FILE DESCRIPTORS: 9 open (3 std) at exit. ==707288== Open file descriptor 12: ==707288== at 0xF2A922D: pipe (pipe.c:29) ==707288== by 0x17D0907D: ??? ==707288== by 0x1326C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707288== by 0xEBB3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707288== by 0xEB4CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707288== by 0xD823D38: PetscInitialize (pinit.c:924) ==707288== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707288== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707288== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707288== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707288== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707288== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707288== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707288== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==707288== ==707288== Open file descriptor 8: /dev/shm/open_mpi.0000 ==707288== at 0xF2ADBCC: __open_nocancel (open64_nocancel.c:39) ==707288== by 0xF231C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==707288== by 0xEAAD822: ??? ==707288== by 0xEAAD96F: ??? ==707288== by 0x133136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707288== by 0x13313938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707288== by 0x132C9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707288== by 0x1326C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707288== by 0xEBB3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707288== by 0xEB4CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707288== by 0xD823D38: PetscInitialize (pinit.c:924) ==707288== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707288== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707288== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==707288== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707288== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707288== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707288== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707288== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==707288== ==707288== Open file descriptor 116: ==707288== ==707288== ==707288== Open file descriptor 112: ==707288== ==707288== ==707288== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==707288== ==707288== ==707288== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==707288== ==707288== ==707288== ==707288== HEAP SUMMARY: ==707288== in use at exit: 700,770 bytes in 9,378 blocks ==707288== total heap usage: 3,332,908 allocs, 3,323,530 frees, 2,276,586,794 bytes allocated ==707288== ==707288== LEAK SUMMARY: ==707288== definitely lost: 0 bytes in 0 blocks ==707288== indirectly lost: 0 bytes in 0 blocks ==707288== possibly lost: 0 bytes in 0 blocks ==707288== still reachable: 56 bytes in 3 blocks ==707288== suppressed: 700,714 bytes in 9,375 blocks ==707288== Reachable blocks (those to which a pointer was found) are not shown. ==707288== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==707288== ==707288== For lists of detected and suppressed errors, rerun with: -s ==707288== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)