==707556== Memcheck, a memory error detector ==707556== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==707556== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==707556== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==707556== Parent PID: 690814 ==707556== ==707556== ==707556== FILE DESCRIPTORS: 9 open (3 std) at exit. ==707556== Open file descriptor 12: ==707556== at 0xDED922D: pipe (pipe.c:29) ==707556== by 0x17D0B07D: ??? ==707556== by 0x1330C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707556== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707556== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707556== by 0xE849D38: PetscInitialize (pinit.c:924) ==707556== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707556== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707556== by 0x1369CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==707556== by 0x131DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707556== by 0x13461C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707556== by 0x1344BD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707556== by 0x134B53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707556== by 0x130100: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==707556== ==707556== Open file descriptor 8: /dev/shm/open_mpi.0000 ==707556== at 0xDEDDBCC: __open_nocancel (open64_nocancel.c:39) ==707556== by 0xDE61C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==707556== by 0xD72F822: ??? ==707556== by 0xD72F96F: ??? ==707556== by 0x133B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707556== by 0x133B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707556== by 0x13367922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==707556== by 0x1330C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==707556== by 0xFBB9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707556== by 0xFB52D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==707556== by 0xE849D38: PetscInitialize (pinit.c:924) ==707556== by 0xD6F758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==707556== by 0xD6F75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==707556== by 0x1369CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==707556== by 0x131DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==707556== by 0x13461C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==707556== by 0x1344BD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==707556== by 0x134B53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==707556== by 0x130100: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==707556== ==707556== Open file descriptor 116: ==707556== ==707556== ==707556== Open file descriptor 112: ==707556== ==707556== ==707556== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==707556== ==707556== ==707556== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==707556== ==707556== ==707556== ==707556== HEAP SUMMARY: ==707556== in use at exit: 700,770 bytes in 9,378 blocks ==707556== total heap usage: 669,109 allocs, 659,731 frees, 1,738,446,445 bytes allocated ==707556== ==707556== LEAK SUMMARY: ==707556== definitely lost: 0 bytes in 0 blocks ==707556== indirectly lost: 0 bytes in 0 blocks ==707556== possibly lost: 0 bytes in 0 blocks ==707556== still reachable: 56 bytes in 3 blocks ==707556== suppressed: 700,714 bytes in 9,375 blocks ==707556== Reachable blocks (those to which a pointer was found) are not shown. ==707556== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==707556== ==707556== For lists of detected and suppressed errors, rerun with: -s ==707556== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)