==692100== Memcheck, a memory error detector ==692100== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692100== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692100== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==692100== Parent PID: 690814 ==692100== ==692100== ==692100== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692100== Open file descriptor 12: ==692100== at 0xF65922D: pipe (pipe.c:29) ==692100== by 0x17D0907D: ??? ==692100== by 0x132704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692100== by 0xEF63418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692100== by 0xEEFCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692100== by 0xDBD3D38: PetscInitialize (pinit.c:924) ==692100== by 0xDAA758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692100== by 0xDAA75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692100== by 0x134C65: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==692100== by 0x12EB1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692100== by 0x131232: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692100== by 0x13112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692100== by 0x131741: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692100== by 0x12D320: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==692100== ==692100== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692100== at 0xF65DBCC: __open_nocancel (open64_nocancel.c:39) ==692100== by 0xF5E1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692100== by 0xEE5D822: ??? ==692100== by 0xEE5D96F: ??? ==692100== by 0x133156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692100== by 0x13315938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692100== by 0x132CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692100== by 0x132702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692100== by 0xEF63418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692100== by 0xEEFCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692100== by 0xDBD3D38: PetscInitialize (pinit.c:924) ==692100== by 0xDAA758B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692100== by 0xDAA75D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692100== by 0x134C65: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==692100== by 0x12EB1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692100== by 0x131232: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692100== by 0x13112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692100== by 0x131741: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692100== by 0x12D320: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==692100== ==692100== Open file descriptor 116: ==692100== ==692100== ==692100== Open file descriptor 112: ==692100== ==692100== ==692100== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==692100== ==692100== ==692100== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692100== ==692100== ==692100== ==692100== HEAP SUMMARY: ==692100== in use at exit: 700,702 bytes in 9,374 blocks ==692100== total heap usage: 7,634,497 allocs, 7,625,123 frees, 2,190,940,353 bytes allocated ==692100== ==692100== LEAK SUMMARY: ==692100== definitely lost: 0 bytes in 0 blocks ==692100== indirectly lost: 0 bytes in 0 blocks ==692100== possibly lost: 0 bytes in 0 blocks ==692100== still reachable: 56 bytes in 3 blocks ==692100== suppressed: 700,646 bytes in 9,371 blocks ==692100== Reachable blocks (those to which a pointer was found) are not shown. ==692100== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692100== ==692100== For lists of detected and suppressed errors, rerun with: -s ==692100== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)