==745935== Memcheck, a memory error detector ==745935== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==745935== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==745935== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==745935== Parent PID: 733335 ==745935== ==745935== ==745935== FILE DESCRIPTORS: 9 open (3 std) at exit. ==745935== Open file descriptor 12: ==745935== at 0x101EC22D: pipe (pipe.c:29) ==745935== by 0x188D607D: ??? ==745935== by 0x13E8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==745935== by 0xFA0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==745935== by 0xF9A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==745935== by 0xE69FD38: PetscInitialize (pinit.c:924) ==745935== by 0xE51158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==745935== by 0xE5115D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==745935== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==745935== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==745935== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==745935== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==745935== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==745935== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==745935== ==745935== Open file descriptor 8: /dev/shm/open_mpi.0000 ==745935== at 0x101F0BCC: __open_nocancel (open64_nocancel.c:39) ==745935== by 0x10174C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==745935== by 0xE549822: ??? ==745935== by 0xE54996F: ??? ==745935== by 0x13F316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==745935== by 0x13F31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==745935== by 0x13EE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==745935== by 0x13E8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==745935== by 0xFA0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==745935== by 0xF9A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==745935== by 0xE69FD38: PetscInitialize (pinit.c:924) ==745935== by 0xE51158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==745935== by 0xE5115D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==745935== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==745935== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==745935== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==745935== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==745935== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==745935== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==745935== ==745935== Open file descriptor 116: ==745935== ==745935== ==745935== Open file descriptor 112: ==745935== ==745935== ==745935== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==745935== ==745935== ==745935== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==745935== ==745935== ==745935== ==745935== HEAP SUMMARY: ==745935== in use at exit: 700,702 bytes in 9,374 blocks ==745935== total heap usage: 3,812,331 allocs, 3,802,957 frees, 1,523,679,941 bytes allocated ==745935== ==745935== LEAK SUMMARY: ==745935== definitely lost: 0 bytes in 0 blocks ==745935== indirectly lost: 0 bytes in 0 blocks ==745935== possibly lost: 0 bytes in 0 blocks ==745935== still reachable: 56 bytes in 3 blocks ==745935== suppressed: 700,646 bytes in 9,371 blocks ==745935== Reachable blocks (those to which a pointer was found) are not shown. ==745935== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==745935== ==745935== For lists of detected and suppressed errors, rerun with: -s ==745935== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)