==735051== Memcheck, a memory error detector ==735051== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==735051== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==735051== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==735051== Parent PID: 733335 ==735051== ==735051== ==735051== FILE DESCRIPTORS: 9 open (3 std) at exit. ==735051== Open file descriptor 12: ==735051== at 0xEAA322D: pipe (pipe.c:29) ==735051== by 0x188D707D: ??? ==735051== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==735051== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735051== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735051== by 0xF32ED38: PetscInitialize (pinit.c:924) ==735051== by 0xE36458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==735051== by 0xE3645D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==735051== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==735051== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==735051== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==735051== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==735051== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==735051== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==735051== ==735051== Open file descriptor 8: /dev/shm/open_mpi.0000 ==735051== at 0xEAA7BCC: __open_nocancel (open64_nocancel.c:39) ==735051== by 0xEA2BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==735051== by 0xE39C822: ??? ==735051== by 0xE39C96F: ??? ==735051== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735051== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735051== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735051== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==735051== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735051== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735051== by 0xF32ED38: PetscInitialize (pinit.c:924) ==735051== by 0xE36458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==735051== by 0xE3645D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==735051== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==735051== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==735051== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==735051== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==735051== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==735051== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==735051== ==735051== Open file descriptor 116: ==735051== ==735051== ==735051== Open file descriptor 112: ==735051== ==735051== ==735051== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==735051== ==735051== ==735051== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==735051== ==735051== ==735051== ==735051== HEAP SUMMARY: ==735051== in use at exit: 700,702 bytes in 9,374 blocks ==735051== total heap usage: 20,193,958 allocs, 20,184,584 frees, 2,577,901,683 bytes allocated ==735051== ==735051== LEAK SUMMARY: ==735051== definitely lost: 0 bytes in 0 blocks ==735051== indirectly lost: 0 bytes in 0 blocks ==735051== possibly lost: 0 bytes in 0 blocks ==735051== still reachable: 56 bytes in 3 blocks ==735051== suppressed: 700,646 bytes in 9,371 blocks ==735051== Reachable blocks (those to which a pointer was found) are not shown. ==735051== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==735051== ==735051== For lists of detected and suppressed errors, rerun with: -s ==735051== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)