==735611== Memcheck, a memory error detector ==735611== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==735611== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==735611== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==735611== Parent PID: 733335 ==735611== ==735611== ==735611== FILE DESCRIPTORS: 9 open (3 std) at exit. ==735611== Open file descriptor 12: ==735611== at 0xEE9B22D: pipe (pipe.c:29) ==735611== by 0x188D707D: ??? ==735611== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==735611== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735611== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735611== by 0xF417D38: PetscInitialize (pinit.c:924) ==735611== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==735611== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==735611== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==735611== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==735611== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==735611== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==735611== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==735611== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==735611== ==735611== Open file descriptor 8: /dev/shm/open_mpi.0000 ==735611== at 0xEE9FBCC: __open_nocancel (open64_nocancel.c:39) ==735611== by 0xEE23C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==735611== by 0xE6AD822: ??? ==735611== by 0xE6AD96F: ??? ==735611== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735611== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735611== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==735611== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==735611== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735611== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==735611== by 0xF417D38: PetscInitialize (pinit.c:924) ==735611== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==735611== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==735611== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==735611== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==735611== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==735611== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==735611== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==735611== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==735611== ==735611== Open file descriptor 116: ==735611== ==735611== ==735611== Open file descriptor 112: ==735611== ==735611== ==735611== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==735611== ==735611== ==735611== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==735611== ==735611== ==735611== ==735611== HEAP SUMMARY: ==735611== in use at exit: 700,702 bytes in 9,374 blocks ==735611== total heap usage: 7,459,692 allocs, 7,450,318 frees, 2,655,314,317 bytes allocated ==735611== ==735611== LEAK SUMMARY: ==735611== definitely lost: 0 bytes in 0 blocks ==735611== indirectly lost: 0 bytes in 0 blocks ==735611== possibly lost: 0 bytes in 0 blocks ==735611== still reachable: 56 bytes in 3 blocks ==735611== suppressed: 700,646 bytes in 9,371 blocks ==735611== Reachable blocks (those to which a pointer was found) are not shown. ==735611== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==735611== ==735611== For lists of detected and suppressed errors, rerun with: -s ==735611== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)