==749977== Memcheck, a memory error detector ==749977== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==749977== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==749977== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==749977== Parent PID: 733335 ==749977== ==749977== ==749977== FILE DESCRIPTORS: 9 open (3 std) at exit. ==749977== Open file descriptor 12: ==749977== at 0xFE7722D: pipe (pipe.c:29) ==749977== by 0x188D707D: ??? ==749977== by 0x13E3E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749977== by 0xF781418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749977== by 0xF71AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749977== by 0xE3F1D38: PetscInitialize (pinit.c:924) ==749977== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749977== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749977== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==749977== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749977== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749977== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749977== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749977== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==749977== ==749977== Open file descriptor 8: /dev/shm/open_mpi.0000 ==749977== at 0xFE7BBCC: __open_nocancel (open64_nocancel.c:39) ==749977== by 0xFDFFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==749977== by 0xF67B822: ??? ==749977== by 0xF67B96F: ??? ==749977== by 0x13EE36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749977== by 0x13EE3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749977== by 0x13E99922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==749977== by 0x13E3E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==749977== by 0xF781418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749977== by 0xF71AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==749977== by 0xE3F1D38: PetscInitialize (pinit.c:924) ==749977== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==749977== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==749977== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==749977== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==749977== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==749977== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==749977== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==749977== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==749977== ==749977== Open file descriptor 116: ==749977== ==749977== ==749977== Open file descriptor 112: ==749977== ==749977== ==749977== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==749977== ==749977== ==749977== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==749977== ==749977== ==749977== ==749977== HEAP SUMMARY: ==749977== in use at exit: 700,770 bytes in 9,378 blocks ==749977== total heap usage: 3,333,181 allocs, 3,323,803 frees, 2,286,875,814 bytes allocated ==749977== ==749977== LEAK SUMMARY: ==749977== definitely lost: 0 bytes in 0 blocks ==749977== indirectly lost: 0 bytes in 0 blocks ==749977== possibly lost: 0 bytes in 0 blocks ==749977== still reachable: 56 bytes in 3 blocks ==749977== suppressed: 700,714 bytes in 9,375 blocks ==749977== Reachable blocks (those to which a pointer was found) are not shown. ==749977== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==749977== ==749977== For lists of detected and suppressed errors, rerun with: -s ==749977== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)