==778755== Memcheck, a memory error detector ==778755== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==778755== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==778755== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==778755== Parent PID: 778752 ==778755== ==778755== ==778755== FILE DESCRIPTORS: 9 open (3 std) at exit. ==778755== Open file descriptor 12: ==778755== at 0x4CC422D: pipe (pipe.c:29) ==778755== by 0xAED707D: ??? ==778755== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==778755== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==778755== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==778755== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==778755== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==778755== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==778755== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==778755== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==778755== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==778755== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==778755== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==778755== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==778755== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==778755== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==778755== by 0x119C80: main (TestCitations.cpp:18) ==778755== ==778755== Open file descriptor 8: /dev/shm/open_mpi.0000 ==778755== at 0x4CC8BCC: __open_nocancel (open64_nocancel.c:39) ==778755== by 0x4C4CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==778755== by 0x4944822: ??? ==778755== by 0x494496F: ??? ==778755== by 0x8A906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==778755== by 0x8A90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==778755== by 0x8A46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==778755== by 0x89EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==778755== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==778755== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==778755== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==778755== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==778755== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==778755== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==778755== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==778755== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==778755== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==778755== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==778755== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==778755== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==778755== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==778755== by 0x119C80: main (TestCitations.cpp:18) ==778755== ==778755== Open file descriptor 116: ==778755== ==778755== ==778755== Open file descriptor 112: ==778755== ==778755== ==778755== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==778755== ==778755== ==778755== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==778755== ==778755== ==778755== ==778755== HEAP SUMMARY: ==778755== in use at exit: 700,274 bytes in 9,377 blocks ==778755== total heap usage: 47,405 allocs, 38,028 frees, 1,353,331,921 bytes allocated ==778755== ==778755== LEAK SUMMARY: ==778755== definitely lost: 0 bytes in 0 blocks ==778755== indirectly lost: 0 bytes in 0 blocks ==778755== possibly lost: 0 bytes in 0 blocks ==778755== still reachable: 24 bytes in 2 blocks ==778755== suppressed: 700,250 bytes in 9,375 blocks ==778755== Reachable blocks (those to which a pointer was found) are not shown. ==778755== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==778755== ==778755== For lists of detected and suppressed errors, rerun with: -s ==778755== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)