==798857== Memcheck, a memory error detector ==798857== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==798857== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==798857== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==798857== Parent PID: 778752 ==798857== ==798857== ==798857== FILE DESCRIPTORS: 9 open (3 std) at exit. ==798857== Open file descriptor 12: ==798857== at 0x1179822D: pipe (pipe.c:29) ==798857== by 0x1A1B807D: ??? ==798857== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==798857== by 0x110A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==798857== by 0x1103BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==798857== by 0xFD32D38: PetscInitialize (pinit.c:924) ==798857== by 0xFBA458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==798857== by 0xFBA45D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==798857== by 0x233B39: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==798857== by 0x229C01: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==798857== by 0x22D79A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==798857== by 0x22D695: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==798857== by 0x22DCA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==798857== by 0x2283C0: main (TestCryptSimulation1d.cpp:18) ==798857== ==798857== Open file descriptor 8: /dev/shm/open_mpi.0000 ==798857== at 0x1179CBCC: __open_nocancel (open64_nocancel.c:39) ==798857== by 0x11720C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==798857== by 0xFBDC822: ??? ==798857== by 0xFBDC96F: ??? ==798857== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==798857== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==798857== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==798857== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==798857== by 0x110A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==798857== by 0x1103BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==798857== by 0xFD32D38: PetscInitialize (pinit.c:924) ==798857== by 0xFBA458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==798857== by 0xFBA45D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==798857== by 0x233B39: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==798857== by 0x229C01: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==798857== by 0x22D79A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==798857== by 0x22D695: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==798857== by 0x22DCA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==798857== by 0x2283C0: main (TestCryptSimulation1d.cpp:18) ==798857== ==798857== Open file descriptor 116: ==798857== ==798857== ==798857== Open file descriptor 112: ==798857== ==798857== ==798857== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==798857== ==798857== ==798857== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==798857== ==798857== ==798857== ==798857== HEAP SUMMARY: ==798857== in use at exit: 700,718 bytes in 9,374 blocks ==798857== total heap usage: 4,060,784 allocs, 4,051,410 frees, 1,967,991,454 bytes allocated ==798857== ==798857== LEAK SUMMARY: ==798857== definitely lost: 0 bytes in 0 blocks ==798857== indirectly lost: 0 bytes in 0 blocks ==798857== possibly lost: 0 bytes in 0 blocks ==798857== still reachable: 56 bytes in 3 blocks ==798857== suppressed: 700,662 bytes in 9,371 blocks ==798857== Reachable blocks (those to which a pointer was found) are not shown. ==798857== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==798857== ==798857== For lists of detected and suppressed errors, rerun with: -s ==798857== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)