==801257== Memcheck, a memory error detector ==801257== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==801257== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==801257== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==801257== Parent PID: 778752 ==801257== ==801257== Warning: invalid file descriptor -1 in syscall close() ==801257== ==801257== FILE DESCRIPTORS: 9 open (3 std) at exit. ==801257== Open file descriptor 12: ==801257== at 0xBE5D22D: pipe (pipe.c:29) ==801257== by 0x140D107D: ??? ==801257== by 0xFD924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==801257== by 0xB74D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==801257== by 0xB6E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==801257== by 0xA028D38: PetscInitialize (pinit.c:924) ==801257== by 0x9E9858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==801257== by 0x9E985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==801257== by 0x154BCC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==801257== by 0x14A8EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==801257== by 0x14DB8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==801257== by 0x14DA2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==801257== by 0x14E0C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==801257== by 0x148BD0: main (TestMonodomainProblem.cpp:19) ==801257== ==801257== Open file descriptor 8: /dev/shm/open_mpi.0000 ==801257== at 0xBE61BCC: __open_nocancel (open64_nocancel.c:39) ==801257== by 0xBDE5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==801257== by 0x9ED0822: ??? ==801257== by 0x9ED096F: ??? ==801257== by 0xFE376DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==801257== by 0xFE37938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==801257== by 0xFDED922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==801257== by 0xFD922DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==801257== by 0xB74D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==801257== by 0xB6E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==801257== by 0xA028D38: PetscInitialize (pinit.c:924) ==801257== by 0x9E9858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==801257== by 0x9E985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==801257== by 0x154BCC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==801257== by 0x14A8EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==801257== by 0x14DB8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==801257== by 0x14DA2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==801257== by 0x14E0C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==801257== by 0x148BD0: main (TestMonodomainProblem.cpp:19) ==801257== ==801257== Open file descriptor 116: ==801257== ==801257== ==801257== Open file descriptor 112: ==801257== ==801257== ==801257== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==801257== ==801257== ==801257== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==801257== ==801257== ==801257== ==801257== HEAP SUMMARY: ==801257== in use at exit: 701,166 bytes in 9,383 blocks ==801257== total heap usage: 6,602,549 allocs, 6,593,166 frees, 4,030,440,881 bytes allocated ==801257== ==801257== LEAK SUMMARY: ==801257== definitely lost: 0 bytes in 0 blocks ==801257== indirectly lost: 0 bytes in 0 blocks ==801257== possibly lost: 0 bytes in 0 blocks ==801257== still reachable: 24 bytes in 2 blocks ==801257== suppressed: 701,142 bytes in 9,381 blocks ==801257== Reachable blocks (those to which a pointer was found) are not shown. ==801257== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==801257== ==801257== For lists of detected and suppressed errors, rerun with: -s ==801257== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)