==780625== Memcheck, a memory error detector ==780625== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==780625== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==780625== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==780625== Parent PID: 778752 ==780625== ==780625== ==780625== FILE DESCRIPTORS: 9 open (3 std) at exit. ==780625== Open file descriptor 12: ==780625== at 0xEAE922D: pipe (pipe.c:29) ==780625== by 0x188D607D: ??? ==780625== by 0x13ED74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==780625== by 0x10785418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==780625== by 0x1071ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==780625== by 0xF415D38: PetscInitialize (pinit.c:924) ==780625== by 0xE2C358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==780625== by 0xE2C35D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==780625== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==780625== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==780625== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==780625== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==780625== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==780625== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==780625== ==780625== Open file descriptor 8: /dev/shm/open_mpi.0000 ==780625== at 0xEAEDBCC: __open_nocancel (open64_nocancel.c:39) ==780625== by 0xEA71C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==780625== by 0xE2FB822: ??? ==780625== by 0xE2FB96F: ??? ==780625== by 0x13F7C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==780625== by 0x13F7C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==780625== by 0x13F32922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==780625== by 0x13ED72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==780625== by 0x10785418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==780625== by 0x1071ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==780625== by 0xF415D38: PetscInitialize (pinit.c:924) ==780625== by 0xE2C358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==780625== by 0xE2C35D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==780625== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==780625== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==780625== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==780625== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==780625== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==780625== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==780625== ==780625== Open file descriptor 116: ==780625== ==780625== ==780625== Open file descriptor 112: ==780625== ==780625== ==780625== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==780625== ==780625== ==780625== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==780625== ==780625== ==780625== ==780625== HEAP SUMMARY: ==780625== in use at exit: 700,702 bytes in 9,374 blocks ==780625== total heap usage: 12,820,309 allocs, 12,810,935 frees, 3,863,411,428 bytes allocated ==780625== ==780625== LEAK SUMMARY: ==780625== definitely lost: 0 bytes in 0 blocks ==780625== indirectly lost: 0 bytes in 0 blocks ==780625== possibly lost: 0 bytes in 0 blocks ==780625== still reachable: 56 bytes in 3 blocks ==780625== suppressed: 700,646 bytes in 9,371 blocks ==780625== Reachable blocks (those to which a pointer was found) are not shown. ==780625== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==780625== ==780625== For lists of detected and suppressed errors, rerun with: -s ==780625== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)