==784629== Memcheck, a memory error detector ==784629== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==784629== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==784629== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==784629== Parent PID: 778752 ==784629== ==784629== ==784629== FILE DESCRIPTORS: 9 open (3 std) at exit. ==784629== Open file descriptor 12: ==784629== at 0xEE5722D: pipe (pipe.c:29) ==784629== by 0x188D507D: ??? ==784629== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==784629== by 0x10785418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==784629== by 0x1071ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==784629== by 0xF415D38: PetscInitialize (pinit.c:924) ==784629== by 0xE67358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==784629== by 0xE6735D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==784629== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==784629== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==784629== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==784629== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==784629== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==784629== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==784629== ==784629== Open file descriptor 8: /dev/shm/open_mpi.0000 ==784629== at 0xEE5BBCC: __open_nocancel (open64_nocancel.c:39) ==784629== by 0xEDDFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==784629== by 0xE6AB822: ??? ==784629== by 0xE6AB96F: ??? ==784629== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==784629== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==784629== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==784629== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==784629== by 0x10785418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==784629== by 0x1071ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==784629== by 0xF415D38: PetscInitialize (pinit.c:924) ==784629== by 0xE67358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==784629== by 0xE6735D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==784629== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==784629== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==784629== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==784629== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==784629== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==784629== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==784629== ==784629== Open file descriptor 116: ==784629== ==784629== ==784629== Open file descriptor 112: ==784629== ==784629== ==784629== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==784629== ==784629== ==784629== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==784629== ==784629== ==784629== ==784629== HEAP SUMMARY: ==784629== in use at exit: 700,770 bytes in 9,378 blocks ==784629== total heap usage: 2,341,036 allocs, 2,331,658 frees, 1,789,307,141 bytes allocated ==784629== ==784629== LEAK SUMMARY: ==784629== definitely lost: 0 bytes in 0 blocks ==784629== indirectly lost: 0 bytes in 0 blocks ==784629== possibly lost: 0 bytes in 0 blocks ==784629== still reachable: 56 bytes in 3 blocks ==784629== suppressed: 700,714 bytes in 9,375 blocks ==784629== Reachable blocks (those to which a pointer was found) are not shown. ==784629== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==784629== ==784629== For lists of detected and suppressed errors, rerun with: -s ==784629== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)