==837195== Memcheck, a memory error detector ==837195== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==837195== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==837195== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==837195== Parent PID: 835468 ==837195== ==837195== ==837195== FILE DESCRIPTORS: 9 open (3 std) at exit. ==837195== Open file descriptor 12: ==837195== at 0xDF8922D: pipe (pipe.c:29) ==837195== by 0x17E5E07D: ??? ==837195== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837195== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837195== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837195== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==837195== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837195== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837195== by 0x2D9B58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837195== by 0x2CFAA1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837195== by 0x2D3F76: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837195== by 0x2D3E71: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837195== by 0x2D4485: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837195== by 0x2CE260: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==837195== ==837195== Open file descriptor 8: /dev/shm/open_mpi.0000 ==837195== at 0xDF8DBCC: __open_nocancel (open64_nocancel.c:39) ==837195== by 0xDF11C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==837195== by 0xD884822: ??? ==837195== by 0xD88496F: ??? ==837195== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837195== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837195== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837195== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837195== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837195== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837195== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==837195== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837195== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837195== by 0x2D9B58: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837195== by 0x2CFAA1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837195== by 0x2D3F76: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837195== by 0x2D3E71: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837195== by 0x2D4485: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837195== by 0x2CE260: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==837195== ==837195== Open file descriptor 116: ==837195== ==837195== ==837195== Open file descriptor 112: ==837195== ==837195== ==837195== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==837195== ==837195== ==837195== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==837195== ==837195== ==837195== ==837195== HEAP SUMMARY: ==837195== in use at exit: 700,770 bytes in 9,378 blocks ==837195== total heap usage: 58,282 allocs, 48,904 frees, 1,355,127,354 bytes allocated ==837195== ==837195== LEAK SUMMARY: ==837195== definitely lost: 0 bytes in 0 blocks ==837195== indirectly lost: 0 bytes in 0 blocks ==837195== possibly lost: 0 bytes in 0 blocks ==837195== still reachable: 56 bytes in 3 blocks ==837195== suppressed: 700,714 bytes in 9,375 blocks ==837195== Reachable blocks (those to which a pointer was found) are not shown. ==837195== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==837195== ==837195== For lists of detected and suppressed errors, rerun with: -s ==837195== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)