==837170== Memcheck, a memory error detector ==837170== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==837170== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==837170== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==837170== Parent PID: 835468 ==837170== ==837170== ==837170== FILE DESCRIPTORS: 9 open (3 std) at exit. ==837170== Open file descriptor 12: ==837170== at 0xE02A22D: pipe (pipe.c:29) ==837170== by 0x17E5E07D: ??? ==837170== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837170== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837170== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837170== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==837170== by 0xD8EB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837170== by 0xD8EB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837170== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837170== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837170== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837170== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837170== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837170== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==837170== ==837170== Open file descriptor 8: /dev/shm/open_mpi.0000 ==837170== at 0xE02EBCC: __open_nocancel (open64_nocancel.c:39) ==837170== by 0xDFB2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==837170== by 0xD923822: ??? ==837170== by 0xD92396F: ??? ==837170== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837170== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837170== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837170== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837170== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837170== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837170== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==837170== by 0xD8EB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837170== by 0xD8EB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837170== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837170== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837170== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837170== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837170== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837170== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==837170== ==837170== Open file descriptor 116: ==837170== ==837170== ==837170== Open file descriptor 112: ==837170== ==837170== ==837170== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==837170== ==837170== ==837170== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==837170== ==837170== ==837170== ==837170== HEAP SUMMARY: ==837170== in use at exit: 700,702 bytes in 9,374 blocks ==837170== total heap usage: 20,192,293 allocs, 20,182,919 frees, 2,577,767,596 bytes allocated ==837170== ==837170== LEAK SUMMARY: ==837170== definitely lost: 0 bytes in 0 blocks ==837170== indirectly lost: 0 bytes in 0 blocks ==837170== possibly lost: 0 bytes in 0 blocks ==837170== still reachable: 56 bytes in 3 blocks ==837170== suppressed: 700,646 bytes in 9,371 blocks ==837170== Reachable blocks (those to which a pointer was found) are not shown. ==837170== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==837170== ==837170== For lists of detected and suppressed errors, rerun with: -s ==837170== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)