==837677== Memcheck, a memory error detector ==837677== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==837677== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==837677== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==837677== Parent PID: 835468 ==837677== ==837677== ==837677== FILE DESCRIPTORS: 9 open (3 std) at exit. ==837677== Open file descriptor 12: ==837677== at 0xE07222D: pipe (pipe.c:29) ==837677== by 0x17E5E07D: ??? ==837677== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837677== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837677== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837677== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837677== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837677== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837677== by 0x222014: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837677== by 0x217FB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837677== by 0x21BCBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837677== by 0x21BB5E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837677== by 0x21C1F5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837677== by 0x2162A0: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==837677== ==837677== Open file descriptor 8: /dev/shm/open_mpi.0000 ==837677== at 0xE076BCC: __open_nocancel (open64_nocancel.c:39) ==837677== by 0xDFFAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==837677== by 0xD884822: ??? ==837677== by 0xD88496F: ??? ==837677== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837677== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837677== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837677== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837677== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837677== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837677== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837677== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837677== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837677== by 0x222014: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837677== by 0x217FB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837677== by 0x21BCBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837677== by 0x21BB5E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837677== by 0x21C1F5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837677== by 0x2162A0: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==837677== ==837677== Open file descriptor 116: ==837677== ==837677== ==837677== Open file descriptor 112: ==837677== ==837677== ==837677== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==837677== ==837677== ==837677== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==837677== ==837677== ==837677== ==837677== HEAP SUMMARY: ==837677== in use at exit: 700,734 bytes in 9,375 blocks ==837677== total heap usage: 17,623,839 allocs, 17,614,464 frees, 29,974,802,668 bytes allocated ==837677== ==837677== LEAK SUMMARY: ==837677== definitely lost: 0 bytes in 0 blocks ==837677== indirectly lost: 0 bytes in 0 blocks ==837677== possibly lost: 0 bytes in 0 blocks ==837677== still reachable: 88 bytes in 4 blocks ==837677== suppressed: 700,646 bytes in 9,371 blocks ==837677== Reachable blocks (those to which a pointer was found) are not shown. ==837677== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==837677== ==837677== For lists of detected and suppressed errors, rerun with: -s ==837677== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)