==837847== Memcheck, a memory error detector ==837847== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==837847== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==837847== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==837847== Parent PID: 835468 ==837847== ==837847== ==837847== FILE DESCRIPTORS: 9 open (3 std) at exit. ==837847== Open file descriptor 12: ==837847== at 0xE42222D: pipe (pipe.c:29) ==837847== by 0x17E5D07D: ??? ==837847== by 0x134674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837847== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837847== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837847== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837847== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837847== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837847== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837847== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837847== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837847== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837847== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837847== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==837847== ==837847== Open file descriptor 8: /dev/shm/open_mpi.0000 ==837847== at 0xE426BCC: __open_nocancel (open64_nocancel.c:39) ==837847== by 0xE3AAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==837847== by 0xDC34822: ??? ==837847== by 0xDC3496F: ??? ==837847== by 0x1350C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837847== by 0x1350C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837847== by 0x134C2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837847== by 0x134672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837847== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837847== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837847== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837847== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837847== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837847== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837847== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837847== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837847== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837847== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837847== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==837847== ==837847== Open file descriptor 116: ==837847== ==837847== ==837847== Open file descriptor 112: ==837847== ==837847== ==837847== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==837847== ==837847== ==837847== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==837847== ==837847== ==837847== ==837847== HEAP SUMMARY: ==837847== in use at exit: 700,702 bytes in 9,374 blocks ==837847== total heap usage: 7,452,256 allocs, 7,442,882 frees, 2,652,314,729 bytes allocated ==837847== ==837847== LEAK SUMMARY: ==837847== definitely lost: 0 bytes in 0 blocks ==837847== indirectly lost: 0 bytes in 0 blocks ==837847== possibly lost: 0 bytes in 0 blocks ==837847== still reachable: 56 bytes in 3 blocks ==837847== suppressed: 700,646 bytes in 9,371 blocks ==837847== Reachable blocks (those to which a pointer was found) are not shown. ==837847== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==837847== ==837847== For lists of detected and suppressed errors, rerun with: -s ==837847== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)