==837416== Memcheck, a memory error detector ==837416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==837416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==837416== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==837416== Parent PID: 835468 ==837416== ==837416== ==837416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==837416== Open file descriptor 12: ==837416== at 0xE07222D: pipe (pipe.c:29) ==837416== by 0x17E5E07D: ??? ==837416== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837416== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837416== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837416== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837416== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837416== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837416== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837416== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837416== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837416== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837416== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837416== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==837416== ==837416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==837416== at 0xE076BCC: __open_nocancel (open64_nocancel.c:39) ==837416== by 0xDFFAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==837416== by 0xD884822: ??? ==837416== by 0xD88496F: ??? ==837416== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837416== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837416== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==837416== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==837416== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837416== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==837416== by 0xE99ED38: PetscInitialize (pinit.c:924) ==837416== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==837416== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==837416== by 0x322FAA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==837416== by 0x317C93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==837416== by 0x31C156: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==837416== by 0x31BFF6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==837416== by 0x31C68D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==837416== by 0x315F80: main (TestOffLatticeSimulation.cpp:19) ==837416== ==837416== Open file descriptor 116: ==837416== ==837416== ==837416== Open file descriptor 112: ==837416== ==837416== ==837416== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==837416== ==837416== ==837416== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==837416== ==837416== ==837416== ==837416== HEAP SUMMARY: ==837416== in use at exit: 700,702 bytes in 9,374 blocks ==837416== total heap usage: 12,718,387 allocs, 12,709,013 frees, 3,858,416,437 bytes allocated ==837416== ==837416== LEAK SUMMARY: ==837416== definitely lost: 0 bytes in 0 blocks ==837416== indirectly lost: 0 bytes in 0 blocks ==837416== possibly lost: 0 bytes in 0 blocks ==837416== still reachable: 56 bytes in 3 blocks ==837416== suppressed: 700,646 bytes in 9,371 blocks ==837416== Reachable blocks (those to which a pointer was found) are not shown. ==837416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==837416== ==837416== For lists of detected and suppressed errors, rerun with: -s ==837416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)