==838013== Memcheck, a memory error detector ==838013== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==838013== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==838013== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==838013== Parent PID: 835468 ==838013== ==838013== ==838013== FILE DESCRIPTORS: 9 open (3 std) at exit. ==838013== Open file descriptor 12: ==838013== at 0xE4EE22D: pipe (pipe.c:29) ==838013== by 0x17E5D07D: ??? ==838013== by 0x135844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==838013== by 0x1018A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==838013== by 0x10123D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==838013== by 0xEE1AD38: PetscInitialize (pinit.c:924) ==838013== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==838013== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==838013== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==838013== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==838013== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==838013== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==838013== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==838013== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==838013== ==838013== Open file descriptor 8: /dev/shm/open_mpi.0000 ==838013== at 0xE4F2BCC: __open_nocancel (open64_nocancel.c:39) ==838013== by 0xE476C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==838013== by 0xD884822: ??? ==838013== by 0xD88496F: ??? ==838013== by 0x136296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==838013== by 0x13629938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==838013== by 0x135DF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==838013== by 0x135842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==838013== by 0x1018A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==838013== by 0x10123D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==838013== by 0xEE1AD38: PetscInitialize (pinit.c:924) ==838013== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==838013== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==838013== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==838013== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==838013== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==838013== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==838013== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==838013== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==838013== ==838013== Open file descriptor 116: ==838013== ==838013== ==838013== Open file descriptor 112: ==838013== ==838013== ==838013== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==838013== ==838013== ==838013== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==838013== ==838013== ==838013== ==838013== HEAP SUMMARY: ==838013== in use at exit: 700,702 bytes in 9,374 blocks ==838013== total heap usage: 6,911,803 allocs, 6,902,429 frees, 8,038,680,428 bytes allocated ==838013== ==838013== LEAK SUMMARY: ==838013== definitely lost: 0 bytes in 0 blocks ==838013== indirectly lost: 0 bytes in 0 blocks ==838013== possibly lost: 0 bytes in 0 blocks ==838013== still reachable: 56 bytes in 3 blocks ==838013== suppressed: 700,646 bytes in 9,371 blocks ==838013== Reachable blocks (those to which a pointer was found) are not shown. ==838013== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==838013== ==838013== For lists of detected and suppressed errors, rerun with: -s ==838013== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)