==842197== Memcheck, a memory error detector ==842197== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==842197== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==842197== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==842197== Parent PID: 835468 ==842197== ==842197== ==842197== FILE DESCRIPTORS: 9 open (3 std) at exit. ==842197== Open file descriptor 12: ==842197== at 0xE07222D: pipe (pipe.c:29) ==842197== by 0x17E5E07D: ??? ==842197== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==842197== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==842197== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==842197== by 0xE99ED38: PetscInitialize (pinit.c:924) ==842197== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==842197== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==842197== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==842197== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==842197== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==842197== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==842197== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==842197== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==842197== ==842197== Open file descriptor 8: /dev/shm/open_mpi.0000 ==842197== at 0xE076BCC: __open_nocancel (open64_nocancel.c:39) ==842197== by 0xDFFAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==842197== by 0xD884822: ??? ==842197== by 0xD88496F: ??? ==842197== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==842197== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==842197== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==842197== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==842197== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==842197== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==842197== by 0xE99ED38: PetscInitialize (pinit.c:924) ==842197== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==842197== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==842197== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==842197== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==842197== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==842197== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==842197== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==842197== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==842197== ==842197== Open file descriptor 116: ==842197== ==842197== ==842197== Open file descriptor 112: ==842197== ==842197== ==842197== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==842197== ==842197== ==842197== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==842197== ==842197== ==842197== ==842197== HEAP SUMMARY: ==842197== in use at exit: 700,718 bytes in 9,375 blocks ==842197== total heap usage: 11,367,947 allocs, 11,358,572 frees, 2,209,018,720 bytes allocated ==842197== ==842197== LEAK SUMMARY: ==842197== definitely lost: 0 bytes in 0 blocks ==842197== indirectly lost: 0 bytes in 0 blocks ==842197== possibly lost: 0 bytes in 0 blocks ==842197== still reachable: 72 bytes in 4 blocks ==842197== suppressed: 700,646 bytes in 9,371 blocks ==842197== Reachable blocks (those to which a pointer was found) are not shown. ==842197== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==842197== ==842197== For lists of detected and suppressed errors, rerun with: -s ==842197== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)