==852124== Memcheck, a memory error detector ==852124== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==852124== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==852124== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==852124== Parent PID: 835468 ==852124== ==852124== ==852124== FILE DESCRIPTORS: 9 open (3 std) at exit. ==852124== Open file descriptor 12: ==852124== at 0xF3FE22D: pipe (pipe.c:29) ==852124== by 0x17E5E07D: ??? ==852124== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==852124== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852124== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852124== by 0xD978D38: PetscInitialize (pinit.c:924) ==852124== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==852124== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==852124== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==852124== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==852124== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==852124== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==852124== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==852124== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==852124== ==852124== Open file descriptor 8: /dev/shm/open_mpi.0000 ==852124== at 0xF402BCC: __open_nocancel (open64_nocancel.c:39) ==852124== by 0xF386C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==852124== by 0xEC02822: ??? ==852124== by 0xEC0296F: ??? ==852124== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852124== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852124== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852124== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==852124== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852124== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852124== by 0xD978D38: PetscInitialize (pinit.c:924) ==852124== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==852124== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==852124== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==852124== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==852124== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==852124== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==852124== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==852124== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==852124== ==852124== Open file descriptor 116: ==852124== ==852124== ==852124== Open file descriptor 112: ==852124== ==852124== ==852124== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==852124== ==852124== ==852124== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==852124== ==852124== ==852124== ==852124== HEAP SUMMARY: ==852124== in use at exit: 700,770 bytes in 9,378 blocks ==852124== total heap usage: 3,332,966 allocs, 3,323,588 frees, 2,276,591,546 bytes allocated ==852124== ==852124== LEAK SUMMARY: ==852124== definitely lost: 0 bytes in 0 blocks ==852124== indirectly lost: 0 bytes in 0 blocks ==852124== possibly lost: 0 bytes in 0 blocks ==852124== still reachable: 56 bytes in 3 blocks ==852124== suppressed: 700,714 bytes in 9,375 blocks ==852124== Reachable blocks (those to which a pointer was found) are not shown. ==852124== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==852124== ==852124== For lists of detected and suppressed errors, rerun with: -s ==852124== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)