==853340== Memcheck, a memory error detector ==853340== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==853340== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==853340== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==853340== Parent PID: 835468 ==853340== ==853340== ==853340== FILE DESCRIPTORS: 9 open (3 std) at exit. ==853340== Open file descriptor 12: ==853340== at 0xCA0F22D: pipe (pipe.c:29) ==853340== by 0x17E6007D: ??? ==853340== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==853340== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853340== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853340== by 0xE8B7D38: PetscInitialize (pinit.c:924) ==853340== by 0xC31258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==853340== by 0xC3125D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==853340== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==853340== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==853340== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==853340== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==853340== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==853340== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==853340== ==853340== Open file descriptor 8: /dev/shm/open_mpi.0000 ==853340== at 0xCA13BCC: __open_nocancel (open64_nocancel.c:39) ==853340== by 0xC997C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==853340== by 0xC34A822: ??? ==853340== by 0xC34A96F: ??? ==853340== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853340== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853340== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853340== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==853340== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853340== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853340== by 0xE8B7D38: PetscInitialize (pinit.c:924) ==853340== by 0xC31258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==853340== by 0xC3125D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==853340== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==853340== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==853340== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==853340== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==853340== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==853340== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==853340== ==853340== Open file descriptor 116: ==853340== ==853340== ==853340== Open file descriptor 112: ==853340== ==853340== ==853340== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==853340== ==853340== ==853340== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==853340== ==853340== ==853340== ==853340== HEAP SUMMARY: ==853340== in use at exit: 700,702 bytes in 9,374 blocks ==853340== total heap usage: 39,441,582 allocs, 39,432,208 frees, 3,793,246,305 bytes allocated ==853340== ==853340== LEAK SUMMARY: ==853340== definitely lost: 0 bytes in 0 blocks ==853340== indirectly lost: 0 bytes in 0 blocks ==853340== possibly lost: 0 bytes in 0 blocks ==853340== still reachable: 56 bytes in 3 blocks ==853340== suppressed: 700,646 bytes in 9,371 blocks ==853340== Reachable blocks (those to which a pointer was found) are not shown. ==853340== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==853340== ==853340== For lists of detected and suppressed errors, rerun with: -s ==853340== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)