==853461== Memcheck, a memory error detector ==853461== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==853461== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==853461== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==853461== Parent PID: 835468 ==853461== ==853461== ==853461== FILE DESCRIPTORS: 9 open (3 std) at exit. ==853461== Open file descriptor 12: ==853461== at 0xE2F722D: pipe (pipe.c:29) ==853461== by 0x17E5D07D: ??? ==853461== by 0x134674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==853461== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853461== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853461== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==853461== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==853461== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==853461== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==853461== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==853461== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==853461== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==853461== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==853461== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==853461== ==853461== Open file descriptor 8: /dev/shm/open_mpi.0000 ==853461== at 0xE2FBBCC: __open_nocancel (open64_nocancel.c:39) ==853461== by 0xE27FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==853461== by 0xDC34822: ??? ==853461== by 0xDC3496F: ??? ==853461== by 0x1350C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853461== by 0x1350C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853461== by 0x134C2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==853461== by 0x134672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==853461== by 0xFC27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853461== by 0xFBC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==853461== by 0xE8B5D38: PetscInitialize (pinit.c:924) ==853461== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==853461== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==853461== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==853461== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==853461== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==853461== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==853461== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==853461== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==853461== ==853461== Open file descriptor 116: ==853461== ==853461== ==853461== Open file descriptor 112: ==853461== ==853461== ==853461== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==853461== ==853461== ==853461== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==853461== ==853461== ==853461== ==853461== HEAP SUMMARY: ==853461== in use at exit: 700,770 bytes in 9,378 blocks ==853461== total heap usage: 2,083,688 allocs, 2,074,310 frees, 1,688,994,849 bytes allocated ==853461== ==853461== LEAK SUMMARY: ==853461== definitely lost: 0 bytes in 0 blocks ==853461== indirectly lost: 0 bytes in 0 blocks ==853461== possibly lost: 0 bytes in 0 blocks ==853461== still reachable: 56 bytes in 3 blocks ==853461== suppressed: 700,714 bytes in 9,375 blocks ==853461== Reachable blocks (those to which a pointer was found) are not shown. ==853461== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==853461== ==853461== For lists of detected and suppressed errors, rerun with: -s ==853461== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)