==900571== Memcheck, a memory error detector ==900571== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==900571== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==900571== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==900571== Parent PID: 898895 ==900571== ==900571== ==900571== FILE DESCRIPTORS: 9 open (3 std) at exit. ==900571== Open file descriptor 12: ==900571== at 0xE07222D: pipe (pipe.c:29) ==900571== by 0x17E5E07D: ??? ==900571== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900571== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900571== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900571== by 0xE99ED38: PetscInitialize (pinit.c:924) ==900571== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900571== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900571== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==900571== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900571== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900571== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900571== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900571== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==900571== ==900571== Open file descriptor 8: /dev/shm/open_mpi.0000 ==900571== at 0xE076BCC: __open_nocancel (open64_nocancel.c:39) ==900571== by 0xDFFAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==900571== by 0xD884822: ??? ==900571== by 0xD88496F: ??? ==900571== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900571== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900571== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900571== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900571== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900571== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900571== by 0xE99ED38: PetscInitialize (pinit.c:924) ==900571== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900571== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900571== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==900571== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900571== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900571== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900571== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900571== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==900571== ==900571== Open file descriptor 116: ==900571== ==900571== ==900571== Open file descriptor 112: ==900571== ==900571== ==900571== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==900571== ==900571== ==900571== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==900571== ==900571== ==900571== ==900571== HEAP SUMMARY: ==900571== in use at exit: 700,770 bytes in 9,378 blocks ==900571== total heap usage: 144,195 allocs, 134,817 frees, 1,381,299,915 bytes allocated ==900571== ==900571== LEAK SUMMARY: ==900571== definitely lost: 0 bytes in 0 blocks ==900571== indirectly lost: 0 bytes in 0 blocks ==900571== possibly lost: 0 bytes in 0 blocks ==900571== still reachable: 56 bytes in 3 blocks ==900571== suppressed: 700,714 bytes in 9,375 blocks ==900571== Reachable blocks (those to which a pointer was found) are not shown. ==900571== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==900571== ==900571== For lists of detected and suppressed errors, rerun with: -s ==900571== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)