==918894== Memcheck, a memory error detector ==918894== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==918894== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==918894== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==918894== Parent PID: 898895 ==918894== ==918894== ==918894== FILE DESCRIPTORS: 9 open (3 std) at exit. ==918894== Open file descriptor 12: ==918894== at 0xFA3522D: pipe (pipe.c:29) ==918894== by 0x1974007D: ??? ==918894== by 0x13CE24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==918894== by 0xF33F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==918894== by 0xF2D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==918894== by 0xDFCFD38: PetscInitialize (pinit.c:924) ==918894== by 0xDE4158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==918894== by 0xDE415D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==918894== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==918894== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==918894== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==918894== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==918894== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==918894== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==918894== ==918894== Open file descriptor 8: /dev/shm/open_mpi.0000 ==918894== at 0xFA39BCC: __open_nocancel (open64_nocancel.c:39) ==918894== by 0xF9BDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==918894== by 0xDE79822: ??? ==918894== by 0xDE7996F: ??? ==918894== by 0x13D876DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==918894== by 0x13D87938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==918894== by 0x13D3D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==918894== by 0x13CE22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==918894== by 0xF33F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==918894== by 0xF2D8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==918894== by 0xDFCFD38: PetscInitialize (pinit.c:924) ==918894== by 0xDE4158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==918894== by 0xDE415D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==918894== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==918894== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==918894== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==918894== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==918894== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==918894== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==918894== ==918894== Open file descriptor 116: ==918894== ==918894== ==918894== Open file descriptor 112: ==918894== ==918894== ==918894== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==918894== ==918894== ==918894== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==918894== ==918894== ==918894== ==918894== HEAP SUMMARY: ==918894== in use at exit: 700,850 bytes in 9,379 blocks ==918894== total heap usage: 863,275 allocs, 853,896 frees, 1,475,827,020 bytes allocated ==918894== ==918894== LEAK SUMMARY: ==918894== definitely lost: 0 bytes in 0 blocks ==918894== indirectly lost: 0 bytes in 0 blocks ==918894== possibly lost: 0 bytes in 0 blocks ==918894== still reachable: 120 bytes in 4 blocks ==918894== suppressed: 700,730 bytes in 9,375 blocks ==918894== Reachable blocks (those to which a pointer was found) are not shown. ==918894== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==918894== ==918894== For lists of detected and suppressed errors, rerun with: -s ==918894== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)