==901281== Memcheck, a memory error detector ==901281== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==901281== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==901281== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==901281== Parent PID: 898895 ==901281== ==901281== ==901281== FILE DESCRIPTORS: 9 open (3 std) at exit. ==901281== Open file descriptor 12: ==901281== at 0xF52722D: pipe (pipe.c:29) ==901281== by 0x17E5E07D: ??? ==901281== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==901281== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==901281== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==901281== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==901281== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==901281== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==901281== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==901281== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==901281== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==901281== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==901281== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==901281== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==901281== ==901281== Open file descriptor 8: /dev/shm/open_mpi.0000 ==901281== at 0xF52BBCC: __open_nocancel (open64_nocancel.c:39) ==901281== by 0xF4AFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==901281== by 0xD884822: ??? ==901281== by 0xD88496F: ??? ==901281== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==901281== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==901281== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==901281== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==901281== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==901281== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==901281== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==901281== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==901281== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==901281== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==901281== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==901281== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==901281== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==901281== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==901281== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==901281== ==901281== Open file descriptor 116: ==901281== ==901281== ==901281== Open file descriptor 112: ==901281== ==901281== ==901281== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==901281== ==901281== ==901281== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==901281== ==901281== ==901281== ==901281== HEAP SUMMARY: ==901281== in use at exit: 700,702 bytes in 9,374 blocks ==901281== total heap usage: 9,143,476 allocs, 9,134,102 frees, 2,548,918,497 bytes allocated ==901281== ==901281== LEAK SUMMARY: ==901281== definitely lost: 0 bytes in 0 blocks ==901281== indirectly lost: 0 bytes in 0 blocks ==901281== possibly lost: 0 bytes in 0 blocks ==901281== still reachable: 56 bytes in 3 blocks ==901281== suppressed: 700,646 bytes in 9,371 blocks ==901281== Reachable blocks (those to which a pointer was found) are not shown. ==901281== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==901281== ==901281== For lists of detected and suppressed errors, rerun with: -s ==901281== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)