==905569== Memcheck, a memory error detector ==905569== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==905569== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==905569== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==905569== Parent PID: 898895 ==905569== ==905569== ==905569== FILE DESCRIPTORS: 9 open (3 std) at exit. ==905569== Open file descriptor 12: ==905569== at 0xE3E022D: pipe (pipe.c:29) ==905569== by 0x17E5D07D: ??? ==905569== by 0x134674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==905569== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==905569== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==905569== by 0xE99ED38: PetscInitialize (pinit.c:924) ==905569== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==905569== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==905569== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==905569== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==905569== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==905569== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==905569== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==905569== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==905569== ==905569== Open file descriptor 8: /dev/shm/open_mpi.0000 ==905569== at 0xE3E4BCC: __open_nocancel (open64_nocancel.c:39) ==905569== by 0xE368C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==905569== by 0xDC34822: ??? ==905569== by 0xDC3496F: ??? ==905569== by 0x1350C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==905569== by 0x1350C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==905569== by 0x134C2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==905569== by 0x134672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==905569== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==905569== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==905569== by 0xE99ED38: PetscInitialize (pinit.c:924) ==905569== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==905569== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==905569== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==905569== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==905569== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==905569== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==905569== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==905569== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==905569== ==905569== Open file descriptor 116: ==905569== ==905569== ==905569== Open file descriptor 112: ==905569== ==905569== ==905569== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==905569== ==905569== ==905569== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==905569== ==905569== ==905569== ==905569== HEAP SUMMARY: ==905569== in use at exit: 700,770 bytes in 9,378 blocks ==905569== total heap usage: 2,336,275 allocs, 2,326,897 frees, 1,789,091,215 bytes allocated ==905569== ==905569== LEAK SUMMARY: ==905569== definitely lost: 0 bytes in 0 blocks ==905569== indirectly lost: 0 bytes in 0 blocks ==905569== possibly lost: 0 bytes in 0 blocks ==905569== still reachable: 56 bytes in 3 blocks ==905569== suppressed: 700,714 bytes in 9,375 blocks ==905569== Reachable blocks (those to which a pointer was found) are not shown. ==905569== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==905569== ==905569== For lists of detected and suppressed errors, rerun with: -s ==905569== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)