==900649== Memcheck, a memory error detector ==900649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==900649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==900649== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==900649== Parent PID: 898895 ==900649== ==900649== ==900649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==900649== Open file descriptor 12: ==900649== at 0xF52722D: pipe (pipe.c:29) ==900649== by 0x17E5E07D: ??? ==900649== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900649== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900649== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900649== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==900649== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900649== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900649== by 0x17752B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900649== by 0x16DFE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900649== by 0x1713D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900649== by 0x171274: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900649== by 0x17190B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900649== by 0x16C2D0: main (TestPottsBasedCellPopulation.cpp:19) ==900649== ==900649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==900649== at 0xF52BBCC: __open_nocancel (open64_nocancel.c:39) ==900649== by 0xF4AFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==900649== by 0xD884822: ??? ==900649== by 0xD88496F: ??? ==900649== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900649== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900649== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900649== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900649== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900649== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900649== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==900649== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900649== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900649== by 0x17752B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900649== by 0x16DFE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900649== by 0x1713D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900649== by 0x171274: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900649== by 0x17190B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900649== by 0x16C2D0: main (TestPottsBasedCellPopulation.cpp:19) ==900649== ==900649== Open file descriptor 116: ==900649== ==900649== ==900649== Open file descriptor 112: ==900649== ==900649== ==900649== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==900649== ==900649== ==900649== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==900649== ==900649== ==900649== ==900649== HEAP SUMMARY: ==900649== in use at exit: 700,770 bytes in 9,378 blocks ==900649== total heap usage: 75,264 allocs, 65,886 frees, 1,358,844,806 bytes allocated ==900649== ==900649== LEAK SUMMARY: ==900649== definitely lost: 0 bytes in 0 blocks ==900649== indirectly lost: 0 bytes in 0 blocks ==900649== possibly lost: 0 bytes in 0 blocks ==900649== still reachable: 56 bytes in 3 blocks ==900649== suppressed: 700,714 bytes in 9,375 blocks ==900649== Reachable blocks (those to which a pointer was found) are not shown. ==900649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==900649== ==900649== For lists of detected and suppressed errors, rerun with: -s ==900649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)