==915522== Memcheck, a memory error detector ==915522== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==915522== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==915522== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==915522== Parent PID: 898895 ==915522== ==915522== ==915522== FILE DESCRIPTORS: 9 open (3 std) at exit. ==915522== Open file descriptor 12: ==915522== at 0xF3FE22D: pipe (pipe.c:29) ==915522== by 0x17E5E07D: ??? ==915522== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==915522== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==915522== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==915522== by 0xD978D38: PetscInitialize (pinit.c:924) ==915522== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==915522== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==915522== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==915522== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==915522== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==915522== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==915522== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==915522== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==915522== ==915522== Open file descriptor 8: /dev/shm/open_mpi.0000 ==915522== at 0xF402BCC: __open_nocancel (open64_nocancel.c:39) ==915522== by 0xF386C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==915522== by 0xEC02822: ??? ==915522== by 0xEC0296F: ??? ==915522== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==915522== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==915522== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==915522== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==915522== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==915522== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==915522== by 0xD978D38: PetscInitialize (pinit.c:924) ==915522== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==915522== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==915522== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==915522== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==915522== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==915522== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==915522== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==915522== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==915522== ==915522== Open file descriptor 116: ==915522== ==915522== ==915522== Open file descriptor 112: ==915522== ==915522== ==915522== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==915522== ==915522== ==915522== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==915522== ==915522== ==915522== ==915522== HEAP SUMMARY: ==915522== in use at exit: 700,770 bytes in 9,378 blocks ==915522== total heap usage: 3,333,604 allocs, 3,324,226 frees, 2,276,573,121 bytes allocated ==915522== ==915522== LEAK SUMMARY: ==915522== definitely lost: 0 bytes in 0 blocks ==915522== indirectly lost: 0 bytes in 0 blocks ==915522== possibly lost: 0 bytes in 0 blocks ==915522== still reachable: 56 bytes in 3 blocks ==915522== suppressed: 700,714 bytes in 9,375 blocks ==915522== Reachable blocks (those to which a pointer was found) are not shown. ==915522== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==915522== ==915522== For lists of detected and suppressed errors, rerun with: -s ==915522== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)