==900187== Memcheck, a memory error detector ==900187== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==900187== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==900187== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==900187== Parent PID: 898895 ==900187== ==900187== ==900187== FILE DESCRIPTORS: 9 open (3 std) at exit. ==900187== Open file descriptor 12: ==900187== at 0xF7AE22D: pipe (pipe.c:29) ==900187== by 0x17E5D07D: ??? ==900187== by 0x133C94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900187== by 0xF0B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900187== by 0xF051D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900187== by 0xDD28D38: PetscInitialize (pinit.c:924) ==900187== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900187== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900187== by 0x134C65: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900187== by 0x12EB1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900187== by 0x131232: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900187== by 0x13112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900187== by 0x131741: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900187== by 0x12D320: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==900187== ==900187== Open file descriptor 8: /dev/shm/open_mpi.0000 ==900187== at 0xF7B2BCC: __open_nocancel (open64_nocancel.c:39) ==900187== by 0xF736C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==900187== by 0xEFB2822: ??? ==900187== by 0xEFB296F: ??? ==900187== by 0x1346E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900187== by 0x1346E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900187== by 0x13424922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900187== by 0x133C92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900187== by 0xF0B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900187== by 0xF051D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900187== by 0xDD28D38: PetscInitialize (pinit.c:924) ==900187== by 0xDBFC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900187== by 0xDBFC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900187== by 0x134C65: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900187== by 0x12EB1D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900187== by 0x131232: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900187== by 0x13112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900187== by 0x131741: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900187== by 0x12D320: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==900187== ==900187== Open file descriptor 116: ==900187== ==900187== ==900187== Open file descriptor 112: ==900187== ==900187== ==900187== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==900187== ==900187== ==900187== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==900187== ==900187== ==900187== ==900187== HEAP SUMMARY: ==900187== in use at exit: 700,702 bytes in 9,374 blocks ==900187== total heap usage: 7,634,558 allocs, 7,625,184 frees, 2,190,945,862 bytes allocated ==900187== ==900187== LEAK SUMMARY: ==900187== definitely lost: 0 bytes in 0 blocks ==900187== indirectly lost: 0 bytes in 0 blocks ==900187== possibly lost: 0 bytes in 0 blocks ==900187== still reachable: 56 bytes in 3 blocks ==900187== suppressed: 700,646 bytes in 9,371 blocks ==900187== Reachable blocks (those to which a pointer was found) are not shown. ==900187== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==900187== ==900187== For lists of detected and suppressed errors, rerun with: -s ==900187== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)