==900667== Memcheck, a memory error detector ==900667== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==900667== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==900667== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==900667== Parent PID: 898895 ==900667== ==900667== ==900667== FILE DESCRIPTORS: 9 open (3 std) at exit. ==900667== Open file descriptor 12: ==900667== at 0xF44022D: pipe (pipe.c:29) ==900667== by 0x17E5E07D: ??? ==900667== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900667== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900667== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900667== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==900667== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900667== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900667== by 0x346DA5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900667== by 0x33B993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900667== by 0x340C06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900667== by 0x340AA6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900667== by 0x34113D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900667== by 0x339C80: main (TestVertexBasedCellPopulation.cpp:19) ==900667== ==900667== Open file descriptor 8: /dev/shm/open_mpi.0000 ==900667== at 0xF444BCC: __open_nocancel (open64_nocancel.c:39) ==900667== by 0xF3C8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==900667== by 0xD884822: ??? ==900667== by 0xD88496F: ??? ==900667== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900667== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900667== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==900667== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==900667== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900667== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==900667== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==900667== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==900667== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==900667== by 0x346DA5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==900667== by 0x33B993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==900667== by 0x340C06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==900667== by 0x340AA6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==900667== by 0x34113D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==900667== by 0x339C80: main (TestVertexBasedCellPopulation.cpp:19) ==900667== ==900667== Open file descriptor 116: ==900667== ==900667== ==900667== Open file descriptor 112: ==900667== ==900667== ==900667== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==900667== ==900667== ==900667== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==900667== ==900667== ==900667== ==900667== HEAP SUMMARY: ==900667== in use at exit: 700,770 bytes in 9,378 blocks ==900667== total heap usage: 80,082 allocs, 70,704 frees, 1,357,389,854 bytes allocated ==900667== ==900667== LEAK SUMMARY: ==900667== definitely lost: 0 bytes in 0 blocks ==900667== indirectly lost: 0 bytes in 0 blocks ==900667== possibly lost: 0 bytes in 0 blocks ==900667== still reachable: 56 bytes in 3 blocks ==900667== suppressed: 700,714 bytes in 9,375 blocks ==900667== Reachable blocks (those to which a pointer was found) are not shown. ==900667== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==900667== ==900667== For lists of detected and suppressed errors, rerun with: -s ==900667== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)