==969509== Memcheck, a memory error detector ==969509== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==969509== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==969509== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==969509== Parent PID: 967822 ==969509== ==969509== ==969509== FILE DESCRIPTORS: 9 open (3 std) at exit. ==969509== Open file descriptor 12: ==969509== at 0xE07222D: pipe (pipe.c:29) ==969509== by 0x17E5E07D: ??? ==969509== by 0x134654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==969509== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969509== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969509== by 0xE99ED38: PetscInitialize (pinit.c:924) ==969509== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==969509== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==969509== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==969509== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==969509== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==969509== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==969509== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==969509== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==969509== ==969509== Open file descriptor 8: /dev/shm/open_mpi.0000 ==969509== at 0xE076BCC: __open_nocancel (open64_nocancel.c:39) ==969509== by 0xDFFAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==969509== by 0xD884822: ??? ==969509== by 0xD88496F: ??? ==969509== by 0x1350A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969509== by 0x1350A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969509== by 0x134C0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969509== by 0x134652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==969509== by 0xFD0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969509== by 0xFCA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969509== by 0xE99ED38: PetscInitialize (pinit.c:924) ==969509== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==969509== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==969509== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==969509== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==969509== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==969509== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==969509== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==969509== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==969509== ==969509== Open file descriptor 116: ==969509== ==969509== ==969509== Open file descriptor 112: ==969509== ==969509== ==969509== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==969509== ==969509== ==969509== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==969509== ==969509== ==969509== ==969509== HEAP SUMMARY: ==969509== in use at exit: 700,770 bytes in 9,378 blocks ==969509== total heap usage: 144,195 allocs, 134,817 frees, 1,381,299,750 bytes allocated ==969509== ==969509== LEAK SUMMARY: ==969509== definitely lost: 0 bytes in 0 blocks ==969509== indirectly lost: 0 bytes in 0 blocks ==969509== possibly lost: 0 bytes in 0 blocks ==969509== still reachable: 56 bytes in 3 blocks ==969509== suppressed: 700,714 bytes in 9,375 blocks ==969509== Reachable blocks (those to which a pointer was found) are not shown. ==969509== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==969509== ==969509== For lists of detected and suppressed errors, rerun with: -s ==969509== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)