==969772== Memcheck, a memory error detector ==969772== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==969772== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==969772== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==969772== Parent PID: 967822 ==969772== ==969772== ==969772== FILE DESCRIPTORS: 9 open (3 std) at exit. ==969772== Open file descriptor 12: ==969772== at 0xF52722D: pipe (pipe.c:29) ==969772== by 0x17E5E07D: ??? ==969772== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==969772== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969772== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969772== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==969772== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==969772== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==969772== by 0x20FC3D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==969772== by 0x208521: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==969772== by 0x20B980: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==969772== by 0x20B87C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==969772== by 0x20BE8F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==969772== by 0x206CE0: main (TestOffLatticeSimulation3d.cpp:18) ==969772== ==969772== Open file descriptor 8: /dev/shm/open_mpi.0000 ==969772== at 0xF52BBCC: __open_nocancel (open64_nocancel.c:39) ==969772== by 0xF4AFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==969772== by 0xD884822: ??? ==969772== by 0xD88496F: ??? ==969772== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969772== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969772== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==969772== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==969772== by 0xED4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969772== by 0xECE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==969772== by 0xD9DAD38: PetscInitialize (pinit.c:924) ==969772== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==969772== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==969772== by 0x20FC3D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==969772== by 0x208521: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==969772== by 0x20B980: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==969772== by 0x20B87C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==969772== by 0x20BE8F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==969772== by 0x206CE0: main (TestOffLatticeSimulation3d.cpp:18) ==969772== ==969772== Open file descriptor 116: ==969772== ==969772== ==969772== Open file descriptor 112: ==969772== ==969772== ==969772== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==969772== ==969772== ==969772== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==969772== ==969772== ==969772== ==969772== HEAP SUMMARY: ==969772== in use at exit: 700,770 bytes in 9,378 blocks ==969772== total heap usage: 850,658 allocs, 841,280 frees, 1,517,577,906 bytes allocated ==969772== ==969772== LEAK SUMMARY: ==969772== definitely lost: 0 bytes in 0 blocks ==969772== indirectly lost: 0 bytes in 0 blocks ==969772== possibly lost: 0 bytes in 0 blocks ==969772== still reachable: 56 bytes in 3 blocks ==969772== suppressed: 700,714 bytes in 9,375 blocks ==969772== Reachable blocks (those to which a pointer was found) are not shown. ==969772== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==969772== ==969772== For lists of detected and suppressed errors, rerun with: -s ==969772== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)