==988450== Memcheck, a memory error detector ==988450== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==988450== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==988450== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==988450== Parent PID: 967822 ==988450== ==988450== ==988450== FILE DESCRIPTORS: 9 open (3 std) at exit. ==988450== Open file descriptor 12: ==988450== at 0x10CDF22D: pipe (pipe.c:29) ==988450== by 0x1974007D: ??? ==988450== by 0x14CA34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==988450== by 0x105E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==988450== by 0x10582D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==988450== by 0xF259D38: PetscInitialize (pinit.c:924) ==988450== by 0xF12D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==988450== by 0xF12D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==988450== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==988450== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==988450== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==988450== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==988450== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==988450== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==988450== ==988450== Open file descriptor 8: /dev/shm/open_mpi.0000 ==988450== at 0x10CE3BCC: __open_nocancel (open64_nocancel.c:39) ==988450== by 0x10C67C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==988450== by 0x104E3822: ??? ==988450== by 0x104E396F: ??? ==988450== by 0x14D486DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==988450== by 0x14D48938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==988450== by 0x14CFE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==988450== by 0x14CA32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==988450== by 0x105E9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==988450== by 0x10582D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==988450== by 0xF259D38: PetscInitialize (pinit.c:924) ==988450== by 0xF12D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==988450== by 0xF12D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==988450== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==988450== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==988450== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==988450== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==988450== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==988450== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==988450== ==988450== Open file descriptor 116: ==988450== ==988450== ==988450== Open file descriptor 112: ==988450== ==988450== ==988450== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==988450== ==988450== ==988450== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==988450== ==988450== ==988450== ==988450== HEAP SUMMARY: ==988450== in use at exit: 700,786 bytes in 9,378 blocks ==988450== total heap usage: 1,753,359 allocs, 1,743,981 frees, 1,529,406,610 bytes allocated ==988450== ==988450== LEAK SUMMARY: ==988450== definitely lost: 0 bytes in 0 blocks ==988450== indirectly lost: 0 bytes in 0 blocks ==988450== possibly lost: 0 bytes in 0 blocks ==988450== still reachable: 56 bytes in 3 blocks ==988450== suppressed: 700,730 bytes in 9,375 blocks ==988450== Reachable blocks (those to which a pointer was found) are not shown. ==988450== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==988450== ==988450== For lists of detected and suppressed errors, rerun with: -s ==988450== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)