==984260== Memcheck, a memory error detector ==984260== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==984260== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==984260== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==984260== Parent PID: 967822 ==984260== ==984260== ==984260== FILE DESCRIPTORS: 9 open (3 std) at exit. ==984260== Open file descriptor 12: ==984260== at 0xF3FE22D: pipe (pipe.c:29) ==984260== by 0x17E5E07D: ??? ==984260== by 0x133C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==984260== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==984260== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==984260== by 0xD978D38: PetscInitialize (pinit.c:924) ==984260== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==984260== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==984260== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==984260== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==984260== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==984260== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==984260== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==984260== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==984260== ==984260== Open file descriptor 8: /dev/shm/open_mpi.0000 ==984260== at 0xF402BCC: __open_nocancel (open64_nocancel.c:39) ==984260== by 0xF386C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==984260== by 0xEC02822: ??? ==984260== by 0xEC0296F: ??? ==984260== by 0x1346C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==984260== by 0x1346C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==984260== by 0x13422922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==984260== by 0x133C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==984260== by 0xED08418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==984260== by 0xECA1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==984260== by 0xD978D38: PetscInitialize (pinit.c:924) ==984260== by 0xD84C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==984260== by 0xD84C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==984260== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==984260== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==984260== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==984260== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==984260== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==984260== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==984260== ==984260== Open file descriptor 116: ==984260== ==984260== ==984260== Open file descriptor 112: ==984260== ==984260== ==984260== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==984260== ==984260== ==984260== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==984260== ==984260== ==984260== ==984260== HEAP SUMMARY: ==984260== in use at exit: 700,702 bytes in 9,374 blocks ==984260== total heap usage: 3,333,597 allocs, 3,324,223 frees, 2,276,572,089 bytes allocated ==984260== ==984260== LEAK SUMMARY: ==984260== definitely lost: 0 bytes in 0 blocks ==984260== indirectly lost: 0 bytes in 0 blocks ==984260== possibly lost: 0 bytes in 0 blocks ==984260== still reachable: 56 bytes in 3 blocks ==984260== suppressed: 700,646 bytes in 9,371 blocks ==984260== Reachable blocks (those to which a pointer was found) are not shown. ==984260== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==984260== ==984260== For lists of detected and suppressed errors, rerun with: -s ==984260== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)