==987918== Memcheck, a memory error detector ==987918== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==987918== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==987918== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==987918== Parent PID: 967822 ==987918== ==987918== ==987918== FILE DESCRIPTORS: 9 open (3 std) at exit. ==987918== Open file descriptor 12: ==987918== at 0x10F6D22D: pipe (pipe.c:29) ==987918== by 0x1974107D: ??? ==987918== by 0x14CF54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==987918== by 0x10879418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==987918== by 0x10812D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==987918== by 0xF507D38: PetscInitialize (pinit.c:924) ==987918== by 0xF37958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==987918== by 0xF3795D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==987918== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==987918== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==987918== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==987918== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==987918== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==987918== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==987918== ==987918== Open file descriptor 8: /dev/shm/open_mpi.0000 ==987918== at 0x10F71BCC: __open_nocancel (open64_nocancel.c:39) ==987918== by 0x10EF5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==987918== by 0xF3B1822: ??? ==987918== by 0xF3B196F: ??? ==987918== by 0x14D9A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==987918== by 0x14D9A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==987918== by 0x14D50922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==987918== by 0x14CF52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==987918== by 0x10879418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==987918== by 0x10812D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==987918== by 0xF507D38: PetscInitialize (pinit.c:924) ==987918== by 0xF37958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==987918== by 0xF3795D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==987918== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==987918== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==987918== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==987918== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==987918== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==987918== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==987918== ==987918== Open file descriptor 116: ==987918== ==987918== ==987918== Open file descriptor 112: ==987918== ==987918== ==987918== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==987918== ==987918== ==987918== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==987918== ==987918== ==987918== ==987918== HEAP SUMMARY: ==987918== in use at exit: 700,754 bytes in 9,377 blocks ==987918== total heap usage: 520,223 allocs, 510,846 frees, 1,561,966,113 bytes allocated ==987918== ==987918== LEAK SUMMARY: ==987918== definitely lost: 0 bytes in 0 blocks ==987918== indirectly lost: 0 bytes in 0 blocks ==987918== possibly lost: 0 bytes in 0 blocks ==987918== still reachable: 24 bytes in 2 blocks ==987918== suppressed: 700,730 bytes in 9,375 blocks ==987918== Reachable blocks (those to which a pointer was found) are not shown. ==987918== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==987918== ==987918== For lists of detected and suppressed errors, rerun with: -s ==987918== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)